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Domain assignment for XP_007639609.1.69978 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_007639609.1.69978
Domain Number 1 Region: 47-138
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 2.88e-37
Family SCAN domain 0.0000555
Further Details:      
 
Domain Number 2 Region: 635-692
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.6e-24
Family Classic zinc finger, C2H2 0.0041
Further Details:      
 
Domain Number 3 Region: 579-636
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.03e-24
Family Classic zinc finger, C2H2 0.0042
Further Details:      
 
Domain Number 4 Region: 524-580
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.09e-22
Family Classic zinc finger, C2H2 0.0027
Further Details:      
 
Domain Number 5 Region: 677-729
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.39e-18
Family Classic zinc finger, C2H2 0.0045
Further Details:      
 
Domain Number 6 Region: 375-426
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.57e-17
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 7 Region: 412-469
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.16e-17
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 8 Region: 468-524
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000165
Family Classic zinc finger, C2H2 0.0099
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_007639609.1.69978
Sequence length 746
Comment PREDICTED: zinc finger protein with KRAB and SCAN domains 7 isoform X1 [Cricetulus griseus]; AA=GCF_000223135.1; RF=representative genome; TAX=10029; STAX=10029; NAME=Cricetulus griseus; AL=Scaffold; RT=Major
Sequence
MTMEGKGTLGLIPRMAVYQKQAGSLTVKQEPGSQTWGQSCSFQKNSPPVCEIFRLHFRQL
CYHEMSGPQEALSRLRELCRWWLMPEVHTKEQILELLVLEQFLSILPRELQKWVQLRHPE
TGEEAVAVVEDFQRHLSGSGEVLPPEQKADMHLKKMESLSATEQSPTSTSSHGSAPEAYV
DPPFDLRAHHLPRGHCGPAFPEAENTRAWVTVGNSTAAAVLGMVRPQEIMADNDYMRRKW
KSLACRQKALSQNTMEENEHSLASLAAGKNRMESSVCTSKHGFSKGSDSPDTSSGGLFGV
ALVEPESGAICEGPLAQVEEQPSDEGRERDCHFLEEKDQENSTKDRDEECRDVGEHGNLS
SHSVESQREAERQTFYRCDECDKVFNQSSHLYGHQRIHNGERPQECSECGKTFRQTSQLI
VHLRAHTAGKPDECSACGKIYLHSSHLKQHQRLHNGERSYKCNEWAKAFPQSSPPIDHKR
THTGEKCYENECGEAFIQSKSLIQHQVLHGGKKTYECNKCGKAFCSGRNLIDHQRIHTGE
KPYGCIECGKAFSRSKCLTRHQSLHTGEKPYRCSECGKAFNQNSQLIDHERVHTGEKPFE
CRQCGKRFSLSKCLIRHQRLHTGEKPYKCSECGKSFNQNSHLIIHQRIHTGEKPYECHEC
GKVFSYSSSLMVHQRTHTGEKPYKCKDCMKAFSDSSQLTVHQRVHTGEKPYGCIECGKAF
SQRSTFNHHQRTHSVEKPSRLLQTPS
Download sequence
Identical sequences XP_007626917.1.28591 XP_007626918.1.28591 XP_007639609.1.69978 XP_016830240.1.69978

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