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Domain assignment for XP_008006479.1.81039 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_008006479.1.81039
Domain Number 1 Region: 129-191
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 3.83e-18
Family LIM domain 0.0012
Further Details:      
 
Domain Number 2 Region: 188-254
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.14e-17
Family LIM domain 0.0011
Further Details:      
 
Domain Number 3 Region: 68-132
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.00000000000000103
Family LIM domain 0.0029
Further Details:      
 
Domain Number 4 Region: 7-71
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.00000000000000171
Family LIM domain 0.019
Further Details:      
 
Domain Number 5 Region: 250-278
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.000000000134
Family LIM domain 0.0012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_008006479.1.81039
Sequence length 279
Comment PREDICTED: four and a half LIM domains protein 2 isoform X3 [Chlorocebus sabaeus]; AA=GCF_000409795.2; RF=representative genome; TAX=60711; STAX=60711; NAME=Chlorocebus sabaeus; AL=Chromosome; RT=Major
Sequence
MTERFDCHHCNESLFGKKYILREESPYCVACFETLFANTCEECGKPIGCDCKDLSYKDRH
WHEACFHCSQCRNSLVDKPFAAKEDQLLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKGS
SWHETCFICHRCQQPIGTKSFIPKDNQNFCVPCYEKQHAMQCVQCKKPITTGGVTYREQP
WHKECFVCTACRKQLSGQRFTARDDFAYCLNCFCDLYAKKCAGCTNPISGLGGTKYISFE
ERQWHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDI
Download sequence
Identical sequences A0A0D9RWX3 A0A2K5HTS7 F7GXH4 G7PMV9
XP_001109039.1.72884 XP_005575239.1.63531 XP_008006477.1.81039 XP_008006478.1.81039 XP_008006479.1.81039 XP_010359284.1.97406 XP_010359285.1.97406 XP_011753830.1.29376 XP_011812015.1.43180 XP_011812016.1.43180 XP_011812017.1.43180 XP_011824944.1.47321 XP_011824946.1.47321 XP_011824947.1.47321 XP_011824948.1.47321 XP_011910872.1.92194 XP_011910874.1.92194 XP_011910875.1.92194 XP_014968530.1.72884 XP_017730527.1.44346 XP_017730528.1.44346 ENSMMUP00000021809 ENSMMUP00000021812 ENSMMUP00000021815 ENSMMUP00000021816 ENSMMUP00000036195 9544.ENSMMUP00000021816 ENSPANP00000003788

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