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Domain assignment for XP_008362130.1.92800 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_008362130.1.92800
Domain Number 1 Region: 294-393
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 5.23e-24
Family B3 DNA binding domain 0.0073
Further Details:      
 
Domain Number 2 Region: 3-97
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 7.06e-23
Family B3 DNA binding domain 0.0022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_008362130.1.92800
Sequence length 417
Comment PREDICTED: B3 domain-containing transcription factor VRN1-like isoform X1 [Malus domestica]; AA=GCF_000148765.1; RF=representative genome; TAX=3750; STAX=3750; NAME=Malus domestica; cultivar=Golden Delicious; AL=Chromosome; RT=Major
Sequence
MRPPYFHKLIVSSTLQAKQLRIPESFVQKFRNELSTIATLTVPDGHVWHVGVKKVDNKFW
FHSGWQDFIEHYSIRVGYFLTFRHEGRSSFTVHIFNLKTAEINYQPNALSSTGGSVYRYQ
VFEEMEDDDSVEILGSSPTSIVTDSLKDKCFGDSANQLTPGKNCTPPSLQNLFNGSKPKN
CVNWSDAGNLHLSKGDDLQAGNESTRDIGVQFNVTELKKTVDEVKLRSPGEDIRSIKKTV
RKKRKVNPNVEESSSQHEKEVEIRFRFYESASARKRTVTAEERERAINAAKTFEPVNPFC
RVVLRPSYLYRGCIMYLPSCFAEKNLNGVSGFIKLQSADGRQWSVRCLYRGGRAKLSQGW
YEFTMDNNLGEGDVCVFELLKMKDIVLKVTVFRVLEDAGFVNQPQLQNLTPAKPNRN
Download sequence
Identical sequences MDP0000238744 XP_008362130.1.92800 MDP0000238744|PACid:22674921

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