SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_008430075.1.1237 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_008430075.1.1237
Domain Number 1 Region: 779-908
Classification Level Classification E-value
Superfamily C2 domain (Calcium/lipid-binding domain, CaLB) 5.8e-32
Family Synaptotagmin-like (S variant) 0.00000108
Further Details:      
 
Domain Number 2 Region: 34-161
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 7.38e-29
Family FYVE, a phosphatidylinositol-3-phosphate binding domain 0.0023
Further Details:      
 
Domain Number 3 Region: 1398-1525
Classification Level Classification E-value
Superfamily C2 domain (Calcium/lipid-binding domain, CaLB) 8.04e-23
Family Synaptotagmin-like (S variant) 0.0043
Further Details:      
 
Domain Number 4 Region: 611-732
Classification Level Classification E-value
Superfamily PDZ domain-like 8.36e-19
Family PDZ domain 0.00000204
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_008430075.1.1237
Sequence length 1548
Comment PREDICTED: regulating synaptic membrane exocytosis protein 2 isoform X29 [Poecilia reticulata]; AA=GCF_000633615.1; RF=representative genome; TAX=8081; STAX=8081; NAME=Poecilia reticulata; strain=Guanapo; AL=Chromosome; RT=Major
Sequence
MSAPHGPRGGPGPAAAAAAAPSAAGAMPEMPDLSHLTEEERKIILGVMDRQKKEEAKEQS
MLKKLHQQFESYKDQVKKMGEETKPAQDQKSEAPTCGICHKTKFADGCGHICSYCQTKFC
ARCGGRVSLRSNKVMWVCNLCRKQQEILTKSGAWFYDSEPGQVRGVFEGGPQGKKAKLHD
PSLYAHQGASGDLTPASDRSRPHGGLLPRQASLDNGTGLRYSGAGDAPIDRKRSPSASRD
PNQKYDQREGGDHPQYAPTDGSMPRSPSDYGDVDPRRVPQGQHIFPDVDAMRSGYRDRRG
PGRWHSQEYPLDQELDGPPSDFDLQRQRQEEFQTRYRSDPNLARYPVKPQPYEEQMRMHA
EVGRLRHERRHSDVSLAYTEQDEPGPIRLSRQHLTERRPPMVGQRSYSVDRSSPGPMGPG
LGGHRGSNRSPPTPHRSPVLGDRSGDLRRGDLGVGGDPMMRQQHHLDPNSAVRKTKREKM
ESMLRNDSLSSDQSESVRPPPPKPHKTKKGGKMRQVSLSSSEEELATTPEYTSCEDVEIE
SESVSEKGESQRGKRKTIGQAFISEPTHTLSERQKKMVRFGGHSFEEDLAWCEPQVKDSG
VDTCSSTTLNEEHSHSEKHPVTWQPSKDGDRLIGRILLNKRMKDGSVPRDSGALLGLKVV
GGKMTESGRLCAFITKVRKGSLADTVGHLRPGDQVLEWNRRILQGATFKEVYNIILESKP
EPQVELVVSRPIGDIPRIPDSTHAQLESSSSSFESQKMDRPSISVTSPMSPSMLRDAPQY
LSGQLSVKLWYDKVGHQLIVTILGAKDLPPREDGRPRNPYVKIYFLPDRSDKSKRRTKTV
KKSLEPKWNQTFMYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLDDE
PHWYKLQTHDVSSMPLPRSSPNAQRRQLHGESPTRRLQRSQRISDSEISDYDCEDGVGVI
TDYRPNGRDFRSSTLSVPEQMMSSNHCSRSADINRARSRSPSVPPPSSRNHGVYPICREE
AVRLLRSTRMTRAYSEGAYSSNFAHQRNHGAMDRHEFHSRSRSADQRPTIERLSSRSRST
ERPHDSSLMRSMPSLPSGRSAPPSPAMTRAHPRSGSVQTSPSSTPMSSRRGRQLPQLPPP
GTDRSMDMEEKTRQMKLKLNMYKQGASSDSRLEQDYHKRSGRDLRGSDNLSAKSSDSDVS
DVSAVSRTSSASRFSSTSYMSVQSERPQGNRKIRDFASKMKNRQMGTSGGVNMTKSTSIS
GDMCNLEKTDGSQSDTAVGTVGTDDKKRRSSIGAKMQAMVGMSRKSRSTSQLSQTEAGGK
KLRSTVQRSTETGLAVEMRSRMTRQASRESTDGSMNSYSSEGNLIFPGVRLSSDAQFSDF
LDGLGPAQLVGRQTLATPPMGDIQIGMVEKKGALEVEVIRARGLVGKPGSKALPAPYVKV
YLLENGACIAKKKTKVARKTLDPLYQQQLPFEESPGGKVLQVIVWGDYGRMDHKSFMGAV
QILLDDLDLSNMVIGWYKLFPPSSLVDPTLAPLTRRASQSSLDSFSRS
Download sequence
Identical sequences XP_008430075.1.1237

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]