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Domain assignment for XP_008704546.1.72690 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_008704546.1.72690
Domain Number 1 Region: 3933-4304
Classification Level Classification E-value
Superfamily RCC1/BLIP-II 7.5e-102
Family Regulator of chromosome condensation RCC1 0.0012
Further Details:      
 
Domain Number 2 Region: 2946-3314
Classification Level Classification E-value
Superfamily RCC1/BLIP-II 4.36e-100
Family Regulator of chromosome condensation RCC1 0.0013
Further Details:      
 
Domain Number 3 Region: 4441-4772
Classification Level Classification E-value
Superfamily Hect, E3 ligase catalytic domain 4.45e-88
Family Hect, E3 ligase catalytic domain 0.0000385
Further Details:      
 
Domain Number 4 Region: 423-779
Classification Level Classification E-value
Superfamily RCC1/BLIP-II 1.83e-87
Family Regulator of chromosome condensation RCC1 0.008
Further Details:      
 
Domain Number 5 Region: 2717-2899
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 3.32e-33
Family APC10-like 0.0064
Further Details:      
 
Domain Number 6 Region: 2542-2619
Classification Level Classification E-value
Superfamily Tudor/PWWP/MBT 1.23e-29
Family CPH domain 0.00065
Further Details:      
 
Domain Number 7 Region: 1851-1917
Classification Level Classification E-value
Superfamily Mib/herc2 domain-like 2.62e-21
Family Mib/herc2 domain 0.00013
Further Details:      
 
Domain Number 8 Region: 1202-1286
Classification Level Classification E-value
Superfamily Cytochrome b5-like heme/steroid binding domain 0.0000000000000589
Family Cytochrome b5 0.0087
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_008704546.1.72690
Sequence length 4818
Comment PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2 [Ursus maritimus]; AA=GCF_000687225.1; RF=representative genome; TAX=29073; STAX=29073; NAME=Ursus maritimus; AL=Scaffold; RT=Major
Sequence
MPSDSFCLAAQTRLDSKWLKTDIQLAFTRDGLCGLWNEMVKDGEIVYTGTELNQNGELPP
RKDDGVDTQSGTKKEDLNDKEKKDEEETPAPACRAKSILESWVWGKQPDVNELKECLSVL
VKEQQALAIQSATTTLSALRLKQRLVILERYFIALNRTVFQENVKVKWKSSSISLPPMDK
KSSRPTGKGVEGLARVGSRAALSFAFAFLRRAWRSGEDADLCSELLQESLDALRALPEAS
LFDESTVSSVWLEVVERATRFLRSVVTGDVHGTPGTKGPGSIPLQDQHLALAILLELAVQ
RGTLSQMLSAILLLLQLWDSGTQETDNERSAQGTSAPLLPLLQRFQSIICSKDAPHTEDD
THLLSGSLSPNESFLRYLTLPQDNELAIDLRQTAVVVMAHLDRLATPCMPPLCSSPTSHK
GSLQEVIGWGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS
DTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPK
VISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG
LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDV
VKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKIIDVAAGST
HCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSC
SEWSIGLRVPFVVDICSMTFEQLDLLLRQVSEGMDGTADWPPPQEKECMAVATLNLLRLQ
LHAAISHQVDPEFLGLGLGSVLLNSLKQTVVALASSAGVLSTVQAAAQAVLQSGWSVLLP
TAEERARALSALLPCAVSGNEVNISPGRRFMIDLLVGSLMADGGLESALNAAITAEIQDI
EAKKEAQKEKEIDEQEASASTFHRSRTPLDKDLINTGIYESSGKQCLPLVQLIQQLLRNI
SLQTVARLKDVARRISSCLDFEQHSRERTASLDLLLRFQRLLISKLYPGESIGQTSDISS
PELMGVGSLLKKYTALLCTHIGDILPVAASIASTSWRHFAEVACIVEGDFTGVLLPELVV
SIVLLLSKNAGLMQEAGAVPLLGGLLEHLDRFNHLAPGKERDDHEELAWPGIMGQNCRNN
EEVTQIRKADLENHNKDGGFWTVIDGKVYDIKDFQTQSLTGNSILAQFAGEDPVVALEAA
LQFEDTRESMHAFCVGQYLEPDQEVVTIPDLGSLSSPLIDTERNLGLLLGLHASYLAMST
PLSPVEIECAKWLQSSIFSGGLQTSQIHYSYNEEKDEDHCSSPGGTPVSKSRLCSHRRAL
GDTMXSYLHLFLLQDFLCQIERYCRQCHLTTPITFPPEHPVEEVGRLLLCCLLKHEDLGH
VALSLVHAGTLGIEQVKHRTLPKSVVDVCRVVYQAKCSLIKTHQEQGRSYKEVCAPVIER
LRFLFNELRPAVCNDLSIMSKFKLLSSLPRWRRIAQKIIRERRKKRVPKKPESTDDEEKI
GNEESDLEEACILPHSPINVDKRPITIKSPKDKWQPLLSTVTGVHKYKWLKQNVQGLYPQ
SALLSTITEFALKEEPVDVEKMRKCLLKQLERAEVRLEGIDTILKLATKNFLLPSVQYAM
FCGWQRLIPEGIDIGEPLTDCLKDVDLIPPFNRMLLEVTFGKLYAWAVQNIRNVLMDANA
KFKELGIQPVPLQTITNENPSGPSLGTTPQARFLLVMLSMLTLQHGANNLXXXXXSGTLA
LTQTALRLIGPSCDNVEEDMNASARGASATVLEETRKEMAPVQLPVSGPELAAMMKIGTR
VMRGVDWKWGDQDGPPPGLGRVIGELGEDGWIRVQWDTGSTNSYRMGKEGKYDLKLAELP
ASTQPSAEDSDTEDDSEAEQIERNIHPTAMMLTSTVNLLQTLCLSAGVHAEIMQSEATKT
LCGLLRMLVESGTTDKTSSPNRLVCREQHRSWCTLGFVRSIALTPHMCAALSSPQWIALL
MKVVEGHAPFTAASLQRQILAVHLLQAVLPSWDKTERARDMKCLVEKLFGFLGSLLTTCS
SDIPFLRESTLRRRRARPQASLTATHSSTLAEEVVALLRTLHSLGQWNGLINKYINSQLH
SVTRSCTGKPSEGAQLEDYFPDSENPEVGGLMAVLAVIGGIDGRLRLGGQVMHDEFGEGT
VTRITPKGRITVQFSDMRMCRVCPLNQLKPLPAVAFSVTNLPFTEPMLSVWAQLVNLAGS
KLEKHKVKKSPKQGFAGQVDLDLLRCQQLKLYILKAGRALLSHQDQLRQILSQPAVQEVT
AAHTDDGAPASPDLGDMSPEGPQPPMILLQQLLASATQPSPVKAIFDKQELEAAALAVCQ
YLAVESTHPSSPVFEDCSSSEATTPVPVQHVRPVRAKKRKQSPAPALPIVVQLMEMGFPR
RNIEFALKSLTGASGNAAGLPGVEALVGWLLDHADVQVTDLSDADTGSEECSDEEVVEDV
DDSAYAVSTGAVVTESQTYKKRADFLSNDDYAVYVRENIQVGMMVRCCRTYEEVCEGDVG
KVIKLDRDGLHDLNVQCDWQQKGGTYWVRYIHVELIGYPPPSSPSHIKIGDKVRVKASVT
TPKYKWGSVTHQSVGVVKAFSANGKDVIVDFPQQSHWTGLLSEMELVPSVHPGVTCDGCQ
MFPINGSRFKCRNCDDFDFCETCFKTRKHNTRHTFGRINEPGQSAIFCGRSGKQLKRCHS
SQPGMLLDSWSRMVKSLNVSSSVNQASRLIDGSEPCWQSSGSQGKHWIRLEIFPDVLVHR
LKMIVDPADSSYMPSLVVVSGGNSLNNLIELKTININPTDTTVSLLNDCTEYHRYIEIAI
KQCRSSGIDCKIHGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNSGSLIRKKAAGLE
SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGK
VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWG
EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG
HGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEG
CNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVE
GLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKIT
RVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSDADSSAASNKISGANN
SKPNRPSLAKILLSLDGNLAKQQALSHILTALQIMYARDAVVGALMPAGMIAPVECPSFS
SSAPPSDISAMASPVNGEECVLAIDIEDRLSPNPWQEKRGEMISSEDAVTPSAVTPSASS
ASSRPFIPVTDDPGAASIIAETMTKTKEDVESQNKASGPEPQSLDEFTSLLVADDTRVMV
DLLKLSVCSRAGDKGRDVLSAVLSGMGTAYPQVADMLLELCVTELEDVATDSQSGRLSSQ
PVVVEXDTSSSGTVKIPGAEGLRVEFDRQCSTERRHDPLTVMDGVNRIVSVRSGREWSDW
SSELRIPGDELKWKFISDGSVNGWGWRFTVYPIMPAAGPKDLLSDRCVLSCPSMDLVTCL
LDFRLNLTSNRSIVPRLAASLAACAQLSALAASHRMWALQRLRKLLTTEFGQSININRLL
GDNDGEARALSFTGSALAALVKGLPEALQRQFEYEDPIVRGGKQLLHSPFFKVLVALACD
LELDILPCCAETHKWAWFRRYCMASRVAVALDKRTPLPRLFLDEVAKKIRELMADSEHMD
VLHESHDIFKREQDEQLVQWMNRRPDDWTLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVP
TPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQH
VFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDV
AAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQ
TLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSG
AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDN
DEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPMEYN
HLQEIPIIALRNRLLLLHHISELFCPCIPMFDLEGSLDETGLGPSVGFDTLRGILISQGK
EAAFRKVVQATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGTKSVFGQMCAKMSSFSP
DSLLLPHRVWKVKFVGESVDDCGGGYSESIAEICEELQNGLTPLLIVTPNGRDESGANRD
CYLFSPAARAPVHTNMFRFLGVLLGIAIRTGSPLSLNLAEPVWKQLAGMSLTIADLSEVD
KDFIPGLMYIRDNEATSEEFEAMSLPFTVPSASGQDIQLSSKYTHITLDNRAEYVRLAIN
YRLHEFDEQVAAVREGMARVVPVPLLSLFTGYELETMVCGSPDIPLHLLKSVATYKGIEP
SASLIQWFWEVMESFSNTERSLFLRFVWGRTRLPRTIADFRGRDFVIQVLDKYNPPDHFL
PESYTCFFLLKLPRYSCKQVLEEKLKYAIHFCKSIDTDDYARIALTGEPAADDSSDDSEN
EDVDSFASDSTQDYLTGH
Download sequence
Identical sequences XP_008704546.1.72690

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