SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_008757363.1.100692 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_008757363.1.100692
Domain Number 1 Region: 100-335
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 7.66e-90
Family Calponin-homology domain, CH-domain 0.00000265
Further Details:      
 
Domain Number 2 Region: 2454-2571
Classification Level Classification E-value
Superfamily PH domain-like 1.1e-31
Family Pleckstrin-homology domain (PH domain) 0.00012
Further Details:      
 
Domain Number 3 Region: 351-472
Classification Level Classification E-value
Superfamily Spectrin repeat 6.54e-31
Family Spectrin repeat 0.00016
Further Details:      
 
Domain Number 4 Region: 1613-1769
Classification Level Classification E-value
Superfamily Spectrin repeat 2.13e-28
Family Spectrin repeat 0.00092
Further Details:      
 
Domain Number 5 Region: 481-583
Classification Level Classification E-value
Superfamily Spectrin repeat 7.2e-23
Family Spectrin repeat 0.00051
Further Details:      
 
Domain Number 6 Region: 894-1026
Classification Level Classification E-value
Superfamily Spectrin repeat 1.02e-22
Family Spectrin repeat 0.003
Further Details:      
 
Domain Number 7 Region: 1934-2090
Classification Level Classification E-value
Superfamily Spectrin repeat 2.52e-22
Family Spectrin repeat 0.0041
Further Details:      
 
Domain Number 8 Region: 1826-1975
Classification Level Classification E-value
Superfamily Spectrin repeat 5.21e-21
Family Spectrin repeat 0.01
Further Details:      
 
Domain Number 9 Region: 1298-1450
Classification Level Classification E-value
Superfamily Spectrin repeat 1.17e-19
Family Spectrin repeat 0.00094
Further Details:      
 
Domain Number 10 Region: 575-696
Classification Level Classification E-value
Superfamily Spectrin repeat 1.57e-17
Family Spectrin repeat 0.00098
Further Details:      
 
Domain Number 11 Region: 787-883
Classification Level Classification E-value
Superfamily Spectrin repeat 3.65e-16
Family Spectrin repeat 0.0027
Further Details:      
 
Domain Number 12 Region: 1131-1246
Classification Level Classification E-value
Superfamily Spectrin repeat 0.00000000000000384
Family Spectrin repeat 0.00035
Further Details:      
 
Domain Number 13 Region: 2092-2154
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000000000345
Family Spectrin repeat 0.0024
Further Details:      
 
Domain Number 14 Region: 695-816
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0000000000558
Family Spectrin repeat 0.0014
Further Details:      
 
Domain Number 15 Region: 1450-1563
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000000259
Family Spectrin repeat 0.0033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_008757363.1.100692
Sequence length 2609
Comment PREDICTED: spectrin beta chain, non-erythrocytic 4 isoform X1 [Rattus norvegicus]; AA=GCF_000001895.5; RF=representative genome; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=mixed; AL=Chromosome; RT=Major
Sequence
MRIWPSGGPAGPNRAGPGPATNARREGGAARRASGTASAAGAQALPSPMAQVPGEVDNME
GPAASNNNNPAARWESPDRGWDREPPAAANAAASLFECSRIKALADEREAVQKKTFTKWV
NSHLARVGCHIGDLYADLRDGFVLTRLLEVLSGEQLPRPTRGRMRIHSLENVDKALQFLK
EQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNRETRSAKDALLLWCQ
MKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDLSKLTKSNANYNLQRAFRTAEQH
LGLARLLDPEDVNMEAPDEKSIITYVVSFYHYFSKMKALAVEGKRIGKVLDQVLEVDKII
ERYEELAAELLAWIHRTVDLISNQKFANSLSGVQQQLQAFTAYCTLEKPVKFQEKGNLEV
LLFSIQSKLRAHNRRLFVPREGCGIWDIDKAWGELEKAEHEREAALRAELIRQEKLELLA
QRFDHKVAMRESWLNENQRLVSQDNFGYELPAVEAAMKKHEAIEADIAAYEERVQGVAEL
AQALAAEGYYDARRVAAQRDSVLRQWALLTGLVGARRTRLEQNLALQKVFQEMVYMVDWM
EEMQTQLLSRECGQHLVEADDLLQKHGLLEGDIAAQSERVEALNAAALRFSQLQGYQPCD
PQVICNRVNHVHGCLSELQEQAARRRAELEASRSLWALLQELEEAESWARDKERLLEATS
GSGGAAGTAGGAHDLSSTARLLAQHKILQGELGGRRALLQQALRRGEELAAAGGSVGPGA
EPLHLAGLAERAASARRRWQRLEEAAARRERRLQEARALHQFGADLDGLLDWLRDAYRLA
AAGDFGHDEASSRRLARQHRALTGEVEAHRGPVGGLRRQLATLGGASGAGPLVVALQVRV
VEAEQLFAEVTEVAALRRQWLRDALAVYRMFGEVHACELWIGEKEQWLLAMRVPDSLDDV
EVVQHRFESLDQEMNSLMGRVLDVNQTVQELVEGGHPSSDEVRSCQDHLNSRWNRIVELV
EQRKEEMSAVLLVENHVLEVAEVRAQVREKRRAVESAPRAGGALQWRLSGLEAALQALEP
RQAALLEEAALLAERFPAQATRLHQGAEELGAEWGALAGAAQACGEAVAAAGRLQRFLRD
LDTFLDWLVRAQEAAGAVEGPLPRSLEEADGLLARHAALKEEVDQREEDYARIVAASEAL
LASDGAELGPGLALDEWLPHLEVGWHKLLGLWEERREALVQAHVYQLFLRDLCQALAVLR
NQEVALSGAELPCTVESVEEAMKRHRDFLTTMELNQQKMQVAVQAAEGLLRQGNAYGEQA
QEAVARLLEKSQENQLRAQQWMQKLLDQLVLQHFLRDCHELDGWIHEKMLMARDGTREDS
HKLHKRWLRHQAFMAELAQNKEWLEKIEREGQQLMQEKPELAASVRKKLGEIRQCWAELE
STTQAKARQLFEASKADQLVQSFAELDKRLLHMESQLQDVDPGGDLATVNSQLKKLQSME
SQVEEWCREVGELQAQTAALPLEQASKELVGERQSAVGERLVRLLEPLQERRRLLLASKE
LHQVAHDLDDELAWVQERLPLAMLTERGTGLQAVQQHIKKNQGLRREIQAHGPRLEEVLE
RAGVLASLRSPEAEAVRRGQEQLQSAWTGLREATERRQQTLDAAFQVEQYYFDVAEVEAW
LGEQELLMMSEDKGKDEQSTLQLLKKHLQLEQGVENYEESIAQLSRQCRALLEMGHPDSE
QISRRQSQVDRLYVALKELGEERRVSLEQQYWLYQLSRQVDELEHWIAEKEVVAGSPELG
QDFEHVSVLQEKFSEFASETGTAGRERLAAVNQMVDELIECGHTAAATMAEWKDGLNEAW
AELLELMGTRAQLLAASRELHKFFSDARELQGQIEEKRRRLPRLTAPPEPRPSASSMQRT
LRAFEHDLQLLVSQVRQLQEGAAQLRTVYAGEHAEAIASREQEVLQGWKELLAACEDARL
HVSSTADALRFHSQARDLLSWMDGIAGQIGAADKPRDVSSVEVLMNYHQGLKTELEARVP
ELTACQELGRSLLLNKSAMADEIQAQLDKLGSRKEEVSEKWDRHWEWLQQMLEVHQFAQE
AVVADAWLTAQEPLLQSRELGSSVDEVEQLIRRHEAFRKAAAAWEERFSSLRRLTTIEKL
KAEQSKQPPTPLLGRKFFGDPTELAAKAAPLLRPGGYDRGLEPLARRASDTLSAEVRTRV
GYVRQELKPERLQPRIDRLPETSGKVEPAAPTAAALDTTDTPGTPAVTEQVRPRPERQEL
ADRAEELPRRRRSERQESTDQPEEAARRRRPERQESADHEGPHSLTLGRYEQMERRRERR
ERRIERQESSEQETPTRGELVKGKATLADIVEQLQEKEAGPGLPAAVPSLPQPRELPPGR
LPNGLEPPERTPRPDRPRARDRPKPRRRPRPREGGEGGGSRRSRSAPAQGGSAPAPPPPP
THTVQHEGFLLRKRELDANRKSSNRSWVNLYCVLSKGELGFYKDSKGPASGGTHGGEPLL
SLHKATSEVASDYKKKKHVFKLQTQDGSEFLLQAKDEEEMNGWLEAVANSVAEHAEIARW
GQTLPTTSSTDEGNPKREGGERRASGRRK
Download sequence
Identical sequences XP_008757362.1.100692 XP_008757363.1.100692 XP_017444609.1.100692

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]