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Domain assignment for XP_008992012.2.60252 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_008992012.2.60252
Domain Number 1 Region: 41-129
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 4.21e-37
Family SCAN domain 0.0000652
Further Details:      
 
Domain Number 2 Region: 349-406
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.99e-26
Family Classic zinc finger, C2H2 0.0032
Further Details:      
 
Domain Number 3 Region: 395-447
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.03e-20
Family Classic zinc finger, C2H2 0.0032
Further Details:      
 
Domain Number 4 Region: 480-530
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.61e-18
Family Classic zinc finger, C2H2 0.0054
Further Details:      
 
Domain Number 5 Region: 311-363
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.97e-18
Family Classic zinc finger, C2H2 0.0052
Further Details:      
 
Domain Number 6 Region: 208-257
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.0000000034
Family KRAB domain (Kruppel-associated box) 0.0056
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_008992012.2.60252
Sequence length 538
Comment PREDICTED: zinc finger protein with KRAB and SCAN domains 4 isoform X1 [Callithrix jacchus]; AA=GCF_000004665.1; RF=representative genome; TAX=9483; STAX=9483; NAME=Callithrix jacchus; AL=Chromosome; RT=Major
Sequence
MARDAPSAADKTGLLTVKVEEEEASALTVELSAPGSPAGGPERSRQHFRGFRFPEAAGPR
EALSRLRELCRQWLQPEMHSKEQILELLVLEQFLTILPGNVQSWVREQHPESGEEVVLLL
EYLERQLEEPAPQVPVGHQGQELLCCKMALLTQTQRSQSSQCQPMKALFKHESLGSQPLQ
DRVLQVPGLAQGGHCREDAMVASRLTPGPQGLLKMEDVALALSPGWTQLDSSQVNLYRDE
KQENHGSLVSLGGEIQTQSRDLPPAEELPEKEHGKILCHLSEDIVQIPTCAEAAEQEGRL
QRKQKNATGGRRHICHECGKSFAQSSGLTKHRRIHTGEKPYECEDCGKTFIGSSALVIHQ
RVHTGEKPYECEECGKVFSHSSNLIKHQRTHTGEKPYECDDCGKAFSQSCSLLEHHKIHT
GEKPYQCNMCGKAFRRNSHLLRHQRIHGDKNFQNPERRMSWEGQGRTESQWENVEAPVSY
KCNECDRSFTRNRSLIEHQKIHTGEKPYQCDTCGKGFTRTSYLVQHQRSHVGKKILSQ
Download sequence
Identical sequences F7IS85
XP_008992012.2.60252 ENSCJAP00000034643 ENSCJAP00000034643

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