SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_008992661.1.60252 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_008992661.1.60252
Domain Number 1 Region: 226-295
Classification Level Classification E-value
Superfamily HLH, helix-loop-helix DNA-binding domain 0.00000000000000366
Family HLH, helix-loop-helix DNA-binding domain 0.0013
Further Details:      
 
Weak hits

Sequence:  XP_008992661.1.60252
Domain Number - Region: 285-374
Classification Level Classification E-value
Superfamily FMN-dependent nitroreductase-like 0.0382
Family NADH oxidase/flavin reductase 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_008992661.1.60252
Sequence length 473
Comment PREDICTED: transcription factor EB isoform X2 [Callithrix jacchus]; AA=GCF_000004665.1; RF=representative genome; TAX=9483; STAX=9483; NAME=Callithrix jacchus; AL=Chromosome; RT=Major
Sequence
MASRIGLRMQLMREQAQQEEQRERMQQQAVMHYMQQQQQQQLGGPPTPAINTPVHFQSPP
PVPGEVLKVQSYLENPTSYHLQQSQHQKVREYLSETYGNKFAAHISPAQGSPKPPPAASP
GVRAGHVLSSSAGNSAPNSPMAMLHIGSNPEREFDDVIDNIMRLDDVLGYINPEMQMPNT
LPLSSSHLNVYSSDPQVTASLVGVTSSSCPADLTQKRELTDAESRALAKERQKKDNHNLI
ERRRRFNINDRIKELGMLIPKANDLDVRWNKGTILKASVDYIRRMQKDLQKSRELENHSR
RLEMTNKQLWLRIQELEMQARVHGLPTTSPSGMNMAELAQQVVKQELPSEEGPGEALMLG
AEVPDPEPLPALPPQAPLPLPTQPPSPFHHLDFSHSLSFGGREDEGPPGYPEPLAPEHGS
PFPGLSKKDLDLMLLDDSLLPLASDPLLSTMSPEASKASSRRSSFSMEEGDVL
Download sequence
Identical sequences A0A2K5SBX6 B0KWN0
XP_008992661.1.60252 ENSCJAP00000004715

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]