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Domain assignment for XP_009060816.1.39240 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_009060816.1.39240
Domain Number 1 Region: 554-815
Classification Level Classification E-value
Superfamily YWTD domain 3.92e-38
Family YWTD domain 0.0000135
Further Details:      
 
Domain Number 2 Region: 1-98,220-417
Classification Level Classification E-value
Superfamily Oligoxyloglucan reducing end-specific cellobiohydrolase 8.63e-32
Family Oligoxyloglucan reducing end-specific cellobiohydrolase 0.016
Further Details:      
 
Domain Number 3 Region: 926-966
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000196
Family LDL receptor-like module 0.00074
Further Details:      
 
Domain Number 4 Region: 889-928
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000144
Family LDL receptor-like module 0.00097
Further Details:      
 
Domain Number 5 Region: 965-1005
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000128
Family LDL receptor-like module 0.00094
Further Details:      
 
Domain Number 6 Region: 1014-1051
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000196
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 7 Region: 1055-1098
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000406
Family LDL receptor-like module 0.0013
Further Details:      
 
Domain Number 8 Region: 1104-1136
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000406
Family LDL receptor-like module 0.0023
Further Details:      
 
Domain Number 9 Region: 22-223
Classification Level Classification E-value
Superfamily Sialidases 0.0000746
Family Sialidases (neuraminidases) 0.04
Further Details:      
 
Weak hits

Sequence:  XP_009060816.1.39240
Domain Number - Region: 1151-1178
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00445
Family LDL receptor-like module 0.0022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_009060816.1.39240
Sequence length 1209
Comment hypothetical protein LOTGIDRAFT_126149, partial [Lottia gigantea]; AA=GCF_000327385.1; RF=representative genome; TAX=225164; STAX=225164; NAME=Lottia gigantea; AL=Scaffold; RT=Major
Sequence
FRTHNFGKTFYKTCGLSFRPKFIHVHPTVVSSLLAFDDKDPQKRLFYSIDFGFSWHLLQP
NVKFFFWYVECYAIIFVRGHFNFNHNWQRTVVLEGVEDFEVKGPYLFATRKRLFGSHNAN
TLQLWVSYKRGEFQAAQFPYSHKNLDFFIADASEGQVMACVTHNESLTNLYISEVEGLKF
SLSLERIVYYNPKGANKDTWISQYTNDTFADIYKVNGMRGIYIASQVKDSDISEQVSLIT
YDKGGEWELITAPTYKPDGSSTNCSKSNRCSLHLTQQYHHLYSKTSSSPITSHQSAPGLI
LAAGVIGASLKGVPDIFVTSNAGVSWHQVLDGLYMYTLGDHGGLLVAIQQYSITNQIFYS
TNEGETWQSYKFMKDDTKIRIYGLLTEPGETTTIFSVYGSYLEKHSWLIVQVDLRSVFRV
NCTKDDYKIWSLPMETPDHGCLLGKKIEFERRIAHAPCFNGKSYVRQQTERNCSCTRDDF
ECDYGFKDMNLMCKTDPDVPAGQIHKIPQNCPEGTFYPYTRGYRKVAGDTCKGGDEHKYA
PLIYSCPIQERREFILYTTGSTIGRIDLDNNNNEILVNTGLTDVTVVDFDYQHNCVFWAD
NVDRKIKKLCMGESDSRNITDLIDNNIRSINGLAYDWTAKTIYWVDGEAKKIEVASKDGK
WRRLLIDSTHLEIPRSITLNPHYGFMYWADWSADNPRICSSWMDGNNGSIKTIVNGSDIE
RPTGLTVDIELERLFWTDSNKIVIMSADLSGNNRKVLVHGTDNLLHPYSIGVYKNEMYWS
DWGRDAILVANKESGLGIETVESMLKGVTDLRVISHTSQQANGACNPGHPQCSQLCLPRP
HHTVQGTQNRTCKCGDDFQHTINTATGDENCRCGPGETMLNGICEMSTNSTTCSSDRFHC
ASGECMPLTWECDHDNDCNDGSDELNCAYSTCDSNQFTCKTGKCIPSQWQCDFDNDCGDG
SDEHNCEYPTCDPNQFQCDNKKCIASAWKCDFDDDCTDKSDERACNYTKDCDAYTCSPWR
FKCTNDTQCIFNTWRCDGDEDCKDGSDEVGCSDRPVCLPEQFHCYKSSSENRQCIWDAWV
CDSDNDCHNGEDEENCTRKFINFEDFKCLYSEGCIRKDQVCDKIKQCSDGSDEMGCSGST
TNSSNQCNTIYTFQCINDCLEWAYLCDGDSDCQDDSDEGVERCGGNFYILKSFLFIIIPF
QPSGIKLLL
Download sequence
Identical sequences V4A587
jgi|Lotgi1|126149|e_gw1.52.276.1 XP_009060816.1.39240

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