SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for XP_009062719.1.39240 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_009062719.1.39240
Domain Number 1 Region: 70-296
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 9.96e-47
Family Nuclear receptor ligand-binding domain 0.0000709
Further Details:      
 
Domain Number 2 Region: 2-40
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.000000346
Family Nuclear receptor 0.0035
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_009062719.1.39240
Sequence length 302
Comment hypothetical protein LOTGIDRAFT_235311 [Lottia gigantea]; AA=GCF_000327385.1; RF=representative genome; TAX=225164; STAX=225164; NAME=Lottia gigantea; AL=Scaffold; RT=Major
Sequence
MDVSNRRFCKRCRLRKCFEIGMRKEYILTEEEKTRKRMRIEENRREKEVEKFRHQSGDVT
SSNNRLRPLDPEEQQAINELITAYQQSLEICVDNDISRNNPSMTDLVNIAEISVRRVIDM
SKKIKSFKALSQTDQISLLKGGSIELLIIRSVITFDREKQHFLDPYDNGKYAMTAEQLKM
GEGSGLFDEHMKFVKSLAMDLKADETVLILLLVISLFSPDRPSISDKTYIAKEQDKYALL
LQHYLESKYPVSYVRTIYPKLLMKLTDIRNLNEEHSQVLLKVNPEGIQPLMKEVLDLNVN
KL
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Identical sequences V3ZV75
XP_009062719.1.39240 jgi|Lotgi1|235311|estExt_fgenesh2_pg.C_sca_630002

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