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Domain assignment for XP_009067050.1.39240 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_009067050.1.39240
Domain Number 1 Region: 130-161
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000772
Family LDL receptor-like module 0.0024
Further Details:      
 
Domain Number 2 Region: 225-263
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000707
Family LDL receptor-like module 0.0044
Further Details:      
 
Weak hits

Sequence:  XP_009067050.1.39240
Domain Number - Region: 45-119
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 0.000753
Family Spermadhesin, CUB domain 0.023
Further Details:      
 
Domain Number - Region: 168-217
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0497
Family LDL receptor-like module 0.0035
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_009067050.1.39240
Sequence length 394
Comment hypothetical protein LOTGIDRAFT_237075 [Lottia gigantea]; AA=GCF_000327385.1; RF=representative genome; TAX=225164; STAX=225164; NAME=Lottia gigantea; AL=Scaffold; RT=Major
Sequence
MVSTLQSYPYPLNPLTSLHPVWDEIIVLIWMICNQLISKESGEGYLLDVSVNYEPYTPDD
LDCSLDYIHVGNDGNNIDLEKMTSYKYCKTLYRENVVSRYNYLWIVVSTSREPARLQFEV
TARPKVECNSTMEFECSPTQCIPTSAVCDGTADCYNGRDEFCMKQYEDNSCFYCFDGTCI
NPVLPRYHDNWGKELWYLCDEYQHCHDGTDERKDICYRVDSRVASMMYCEPSKNSTGQSV
LMWNTLQCDGIQHCRDGSDESKERCSDGNEKESIYKPVSIIIIICFLIFSIIGTLVALKV
YKRQQRKRINSELNQIETTHLHSESDTLTQKVCSIAQTTDPDHCESISEDSLSLTSSNPG
TLKSYQDVKLEWVEHQDDGTVEYIDDNGVRYTDL
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Identical sequences V3ZDX3
XP_009067050.1.39240 jgi|Lotgi1|237075|estExt_fgenesh2_pg.C_sca_940029

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