SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_009067287.1.39240 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_009067287.1.39240
Domain Number 1 Region: 77-339
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 3.41e-46
Family Nuclear receptor ligand-binding domain 0.0000934
Further Details:      
 
Domain Number 2 Region: 4-91
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.53e-27
Family Nuclear receptor 0.0002
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_009067287.1.39240
Sequence length 343
Comment hypothetical protein LOTGIDRAFT_135497, partial [Lottia gigantea]; AA=GCF_000327385.1; RF=representative genome; TAX=225164; STAX=225164; NAME=Lottia gigantea; AL=Scaffold; RT=Major
Sequence
RLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHKNRAYTCKAQGEMKGMCPIDKTHR
NQCRSCRLKKCFDADMNKDAVQHERGPRKPKLKGTDLSLGHHHNQHGHHRQVTQEVPIDL
RVTSSPKNTFPLPQDCITNIASNPNVWHEVMARLLFTIIGWVKQIPAFMILTEADQVILL
TTSWKDLFLLGIVQWGLPVDVNGIHRSINFLGNVGEMNPTTELDRLTETIARLREMALDP
TELTCLKAICLFKSGKEVNHADGTNLVDVKTVENLQEQAHLMLTEHIQLQYPRQMVRFGR
LLMLVSKLQTLKPSFIERVFFRTIVGNISIEKLVGNILQGDLV
Download sequence
Identical sequences V3ZD78
jgi|Lotgi1|135497|e_gw1.98.66.1 XP_009067287.1.39240

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]