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Domain assignment for XP_010257466.1.60036 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_010257466.1.60036
Domain Number 1 Region: 172-248
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 0.00000000000000555
Family Eukaryotic type KH-domain (KH-domain type I) 0.0018
Further Details:      
 
Domain Number 2 Region: 270-302
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.00000000549
Family CCCH zinc finger 0.0015
Further Details:      
 
Domain Number 3 Region: 101-133
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0000000249
Family CCCH zinc finger 0.0019
Further Details:      
 
Domain Number 4 Region: 38-63
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.0000085
Family CCCH zinc finger 0.0038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_010257466.1.60036
Sequence length 306
Comment PREDICTED: zinc finger CCCH domain-containing protein 14 [Nelumbo nucifera]; AA=GCF_000365185.1; RF=representative genome; TAX=4432; STAX=4432; NAME=Nelumbo nucifera; AL=Scaffold; RT=Major
Sequence
MDFGAARKRGRGDPALNGNGGLKRSKQETESFTPGIGSKSKPCTKFFSTAGCPFGEGCHF
LHYVPGGINTVAHMTNLADLAVPSSRNTVGHHPIPDGSAPPAVKTRMCNKFNTAEGCKFG
EKCHFAHGERELGKPIVSSHEDPRALGGAMTGGGRLAGRLEPPPPPPGLAAAASFGASAT
AKISVDASLAGAIIGKGGVNSKQICRLTGAKLAIREHESDPNLRNIELEGTFDQIKQASA
MVRELIVNIGSAAGPGKNPGVPAAAQAVAASNYKTKLCENFAKGSCTFGDRCHFAHGAAD
LRKQGV
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Identical sequences A0A1U7ZT20
XP_010257466.1.60036

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