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Domain assignment for XP_010321285.1.44838 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_010321285.1.44838
Domain Number 1 Region: 121-259
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 6.15e-41
Family B3 DNA binding domain 0.0052
Further Details:      
 
Domain Number 2 Region: 1003-1063
Classification Level Classification E-value
Superfamily CAD & PB1 domains 0.00000265
Family PB1 domain 0.029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_010321285.1.44838
Sequence length 1097
Comment PREDICTED: auxin response factor 19-1 isoform X2 [Solanum lycopersicum]; AA=GCF_000188115.3; RF=representative genome; TAX=4081; STAX=4081; NAME=Solanum lycopersicum; cultivar=Heinz 1706; AL=Chromosome; RT=Major
Sequence
MKTPGNGAGGGNVNPAEGEKKNLNPELWQACAGPLVNLPVAGTHVVYFPQGHSEQVAASI
KKDVEAQIPNYPNLPAKLICLLHNVTLHADPETDEVYAQMTLQPVPSFDKEALLRSDLSM
KANKPQPEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDYSLQPPAQELVARDLHDNIW
TFRHVYRGQPKRHLLTTGWSLVVSGKRLFAGDSVLFIRDEKHQFLLGIRKANRQPTNLSS
SVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRAGPSEFVIPLAKYYKATYSSQISLGMR
FRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERINRVSIWEIE
PITAPFLICSSPFFSSKRPRQPGMPDGDYSDMDGMFKRTMPWLGDDFGMADPQGLPGLSL
IQWMNMQKNPSLANPMIPNYMNSLSGSALQNLAGADLSRQLGMAAPQFQQQQQMQHNLQF
NNAHRPNQQLDQLQKLPAAALNSLDSIMQSQQQLSDVSQQPRQNLTTQSLPTTQVHTQHI
QAQSLGQSQNVLPPQQSVQNQNQLQRNLPQSLSQQHPQQQILGQTQQQSFMSSQAPDPVN
QQQHFSDNQAQLQMLQKLHQQQKSLLAQQSGLQQPSQLGSIQDHQKQLMDASQNFSRSLA
TNQMLDASQTTSTSLPHSQVVQQQMTRINSPSNLRFSQPTQQPKLQQQQSGNLSDLSGPV
NYPLPRTSYQLSANGSNLTGTAGGGQSVVIDDVPSWSTSVSTNNCHSVVQPNMNGRITGA
RDEMTHCSGPLEVMSANNNLQPKSDVKPSVNVVSKSQNHGFLAPQTLNTSGIQFDYLDSS
SSATSACLSQNDVQLQQTATDPLSGSSQPLIFRDSPDGGEVQGDPRNNVAFGAANMENNQ
LGLPMIPDPLITKSSMGSRKDFSDNLSSGGGMLSSYENPKEAQPELLASMASDYVTFNSI
DSTINDGSFMDRGAWEPPPQLPRLRTYTKVYKRGAVGRSIDIARYSGYEELKLDLARRFG
IEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEFVSCVRCIKILSPQEVQQMSLDGDFG
GSVLQNQDCSSSDAGDV
Download sequence
Identical sequences K4C0Y0
Solyc05g047460.2.1 Solyc05g047460.2.1 XP_010321285.1.44838

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