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Domain assignment for XP_010818546.1.76553 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_010818546.1.76553
Domain Number 1 Region: 29-331
Classification Level Classification E-value
Superfamily L domain-like 2.55e-48
Family Internalin LRR domain 0.034
Further Details:      
 
Domain Number 2 Region: 339-688
Classification Level Classification E-value
Superfamily L domain-like 1e-42
Family Ngr ectodomain-like 0.01
Further Details:      
 
Domain Number 3 Region: 753-901
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 1.16e-32
Family Toll/Interleukin receptor TIR domain 0.00036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_010818546.1.76553
Sequence length 904
Comment PREDICTED: toll-like receptor 3 isoform X2 [Bos taurus]; AA=GCF_000003055.6; RF=representative genome; TAX=9913; STAX=9913; NAME=Bos taurus; breed=Hereford; AL=Chromosome; RT=Minor
Sequence
MSRPLPYHIHFFSGLLTCWILCTSSAHKCTVRHEVADCSHLKLTQIPDDLPTNITVLNLT
HNQLRRLPPANFTRYSQLTILDGGFNSISKLEPELCQSLPWLEILNLQHNEISQLSDKTF
IFCMNLTELHLMSNSIQKIKNDPFKNLKNLIKLDLSHNGLSSTKLGTQLQLENLQELLLS
NNKISSLTPEEFDFLGNSSLKRLELSSNQIKEFSPGCFHTLGELSGLSLNNAKLSPSLTE
KLCLELSNTSIENLSLSSNQLDTISHTTFDGLKQTNLTTLDLSRNSLRVMGNDSFAWLPH
LEYLSLEYNNIEHLSSRSFYGLSNLRRLDLRRSFTRQSISLTSLPKIDDFSFQWLKCLEY
LNMDDNNFPGIKRNTFTGLVRLKFLSLSNSFSSLRTLTNETFLSLAGCPLLLLNLTKNKI
SKIQSGAFSWLGHLEVLDLGLNEIGQELTGQEWRGLDNIVEIYLSYNKYLELTTNSFTSV
PSLQRLMLRRVALKNVDCSPSPFRPLPNLVILDLSNNNIANINDELLKGLEKLEILDLQH
NNLARLWKHANPGGPVQFLKGLFHLHILNLGSNGFDEIPVEAFKDLRELKSIDLGMNNLN
ILPQSVFDNQVSLKSLSLQKNLITSVQKTVFGPAFRNLSYLDMRFNPFDCTCESIAWFVN
WINSTHTNISELSNHYLCNTPPQYHGYPVMLFDVSPCKDSAPFELLFMININILLIFIFI
VLLIHFEGWRISFYWNVSVHRVLGFKEIDRAEQFEYAAYIIHAYKDRDWVWKHFSPMEEE
DHTLRFCLEERDFEAGVLELEAIVNSIRRSRKIIFVVTQNLLKDPLCKRFKVHHAVQQAI
EQNLDSIILIFLEEIPDYKLNHALCLRRGMFKSHCILNWPVQKERVNAFHHKLKVALGSR
NSAH
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Identical sequences A5H649 A5H652
XP_005226014.1.76553 XP_010818546.1.76553 ENSBTAP00000011445 ENSBTAP00000011445

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