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Domain assignment for XP_011480115.1.28442 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_011480115.1.28442
Domain Number 1 Region: 2-60
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.94e-19
Family HkH motif-containing C2H2 finger 0.04
Further Details:      
 
Domain Number 2 Region: 55-81
Classification Level Classification E-value
Superfamily CCCH zinc finger 0.00000235
Family CCCH zinc finger 0.0039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_011480115.1.28442
Sequence length 175
Comment zinc finger matrin-type protein 5 [Oryzias latipes]; AA=GCF_000313675.1; RF=representative genome; TAX=8090; STAX=8090; NAME=Oryzias latipes; strain=Hd-rR; AL=Chromosome; RT=Major
Sequence
MGKRYYCDYCDRSFQDNMHNRKKHLNGVQHHRAKKAWFDQFRDSAAILYDEQVKKTCRKF
LLKGFCDFGANCRFSHMSEEEQLMLKRQLEDEKQNKEDAADRMMAGRSVQEWLSKREKRK
AALSSKGDLKTKEDREEVEEDNEIPHQLLSMPDLPPSLLPPPPGGWRVFVNAEWD
Download sequence
Identical sequences H2LVS3
ENSORLP00000010208 8090.ENSORLP00000010208 XP_004074829.1.28442 XP_011480115.1.28442 ENSORLP00000010208

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