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Domain assignment for XP_011656791.1.97903 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_011656791.1.97903
Domain Number 1 Region: 927-1105
Classification Level Classification E-value
Superfamily HAD-like 5.96e-32
Family NLI interacting factor-like phosphatase 0.021
Further Details:      
 
Domain Number 2 Region: 1160-1250
Classification Level Classification E-value
Superfamily BRCT domain 1.37e-18
Family BRCT domain 0.047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_011656791.1.97903
Sequence length 1251
Comment PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3 [Cucumis sativus]; AA=GCF_000004075.2; RF=representative genome; TAX=3659; STAX=3659; NAME=Cucumis sativus; cultivar=9930; AL=Chromosome; RT=Major
Sequence
MGKDEILKIEDVEEGEISDTASVEEISEEDFNKLDSSASPKVVVPSKDSNRETRVWTMSD
LYKNYPAMRHGYASGLYNLAWAQAVQNKPLNDIFVMEADLDEKSKHSSSTPFGNAKDDGS
NTTKEEDRVVIDDSGDEMNCDNANGEKEEGELEEGEIDMDTEFVEEVADSKAMLSDSRDM
DINGQEFDLETKELDELLKFIQKTLDGVTIDAAQKSFQEVCSQIHSSIETFVELLQGKVV
PRKDALIQRLYAALRLINSVFCSMNLSEKEEHKEHLSRLLSYVKNCDPPLFSPEQIKSVE
VKMPSTDSLDHLPSMRGSAKEVEIHIPNGVKDMDFYSAYTSTSSQLTPSNKLASDSIPFG
VKGKNNLNILSEGLQSGVSSIKGRGPLLPLLDLHKDHDADSLPSPTREAPTIFSVQKSGN
APTKMAFPVDGSRSHPYETDALKAVSTYQQKFGRSSFSMADRLPSPTPSEEHDGGGDIGG
EVSSSSIIRSLKSSNVSKPGQKSNSASNVSTGLFPNMDSSSTRVLISPLNVAPPSSVSNP
TVKPLAKSRDPRLRIVNSDASGMDLNPRTMASVQSSSILESAATLHLRKQKMDGEPNTDG
PEVKRLRIGSQNLAVAASDVRAVSGSGGWLEDTMPAGPRLFNRNQMEIAEANATEKSNVT
NNSGSGNECTPTVNNSNDASLPSLLKDIVVNPTMLLNLLKMSQQQQLAAELKLKSSEPEK
NAICPTSLNPCQGSSPLINAPVATSGILQQSAGTPSASPVVAVGRQDDLGKVRMKPRDPR
RVLHGNSLQKVGSLGNDQLKGVVPTASNTEGSRDIPNGHKQEGQGDSKLASSQTILPDIG
RQFTNNLKNIADIMSVPSPPTSSPNSSSKPVGSSSMDSKPVTTAFQAVDMAASSRSQGAW
GDLEHLFDSYDDKQKAAIQRERARRIEEQKKMFAARKLCLVLDLDHTLLNSAKFVEVDPV
HDEILRKKEEQDREKAQRHLFRFPHMGMWTKLRPGVWNFLEKASELYELHLYTMGNKLYA
TEMAKVLDPKGVLFAGRVISRGDDGDPLDGDDRVPKSKDLEGVLGMESGVVIIDDSIRVW
PHNKMNLIVVERYTYFPCSRRQFGLLGPSLLEIDHDERPEDGTLASSLGVIQRIHQSFFS
NPELDQVDVRTILSAEQQKILAGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAQCTNQID
EQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRATEQDFAIKP
Download sequence
Identical sequences A0A0A0KAB9
Cucsa.349260.1|PACid:16979751 XP_011656791.1.97903

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