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Domain assignment for XP_011728288.1.29376 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_011728288.1.29376
Domain Number 1 Region: 20-141
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 1.5e-36
Family Cold shock DNA-binding domain-like 0.00068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_011728288.1.29376
Sequence length 143
Comment PREDICTED: 40S ribosomal protein S23 [Macaca nemestrina]; AA=GCF_000956065.1; RF=representative genome; TAX=9545; STAX=9545; NAME=Macaca nemestrina; AL=Scaffold; RT=Major
Sequence
MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK
QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF
KVVKVANVSLLALYKGKKERPRS
Download sequence
Identical sequences A0A096NP85 A0A0D9RQZ1 A0A0P6CGK7 A0A0P6J0V6 A0A151PI29 A0A1S2ZG55 A0A1S3F6F2 A0A1U7SZU0 A0A218V0T9 A0A226N4F0 A0A250YA42 A0A286XV32 A0A2I2ZQV9 A0A2I3GPZ1 A0A2I3TP93 A0A2K5C281 A0A2K5Q0L1 A0A2K5WRR8 A0A2K6CBZ5 A0A2K6GND3 A0A2K6PRF0 A0A2K6TGP2 A8K517 B5FZK6 F1NDC2 F2X222 F2Z512 F6VZ92 F7CK00 F7ESV5 F7H6F1 G1KKV8 G3HIY3 G3W2J1 H2PG10 H3B751 I3NDF7 J9NZX6 M3Y9Q0 M7AVM7 P62266 P62267 P62268 P62298 Q3T199
ENSBTAP00000017770 ENSLACP00000017722 ENSP00000296674 ENSACAP00000010909 ENSPPYP00000017448 2zkql ENSSSCP00000015028 ENSPANP00000014809 ENSPPYP00000017448 ENSMMUP00000004769 ENSP00000296674 ENSCAFP00000038847 ENSMPUP00000008057 ENSGALP00000025130 ENSNLEP00000016001 ENSCJAP00000020713 gi|4506701|ref|NP_001016.1| ENSMODP00000025337 ENSSHAP00000009646 ENSCAFP00000038847 ENSMPUP00000008057 ENSCJAP00000020713 ENSMMUP00000004769 ENSMODP00000025337 ENSLACP00000017722 ENSP00000296674 ENSMUSP00000054490 ENSBTAP00000017770 ENSOANP00000020125 ENSRNOP00000022348 10090.ENSMUSP00000054490 10116.ENSRNOP00000022348 9258.ENSOANP00000020125 9544.ENSMMUP00000004769 9606.ENSP00000296674 9823.ENSSSCP00000015028 4cxg_X 4cxh_X 4d61_X 4kzx_X 4kzy_X 4kzz_X 4ug0_SX 4ujc_CX 4ujd_CX 4uje_BX 4v5z_Al 4v6x_AX 5a2q_X 5aj0_BX 5flx_X 5lks_SX 5lzs_XX 5lzt_XX 5lzu_XX 5lzv_XX 5lzw_XX 5lzx_XX 5lzy_XX 5lzz_XX 5oa3_X 5t2c_AD 5vyc_X1 5vyc_X2 5vyc_X3 5vyc_X4 5vyc_X5 5vyc_X6 6ek0_SX 6g18_X 6g4s_X 6g4w_X 6g51_X 6g53_X 6g5h_X 6g5i_X 6hcf_Y1 6hcj_Y2 6hcm_Y1 6hcq_Y2 ENSNLEP00000016001 ENSSHAP00000009646 NP_001016.1.87134 NP_001016.1.92137 NP_001029862.1.59421 NP_001029862.1.76553 NP_001180509.1.72884 NP_001232329.1.42559 NP_001269298.1.28644 NP_001291864.1.58354 NP_077137.1.92730 NP_511172.1.100692 NP_511172.1.4139 XP_001504690.1.31192 XP_001511270.1.37387 XP_002713980.1.1745 XP_002744843.1.60252 XP_003216326.1.98722 XP_003261593.1.23891 XP_003479546.1.53824 XP_003503773.1.69978 XP_003759921.1.9362 XP_003786005.1.62490 XP_003920840.1.74449 XP_004009109.1.66739 XP_004042281.1.27298 XP_004281689.1.21590 XP_004325228.1.83887 XP_004405675.1.74151 XP_004420454.1.5094 XP_004483487.1.11602 XP_004613223.1.94378 XP_004640994.1.9945 XP_004651701.1.11716 XP_004678215.1.23501 XP_004759191.1.14098 XP_004841695.1.39548 XP_005143837.1.78019 XP_005288226.1.60341 XP_005288227.1.60341 XP_005315713.1.77405 XP_005356574.1.66349 XP_005529506.1.90289 XP_005618212.1.84170 XP_005858171.1.60319 XP_005903824.1.15283 XP_005997828.1.90931 XP_006059412.1.26621 XP_006081309.1.53796 XP_006124396.2.96668 XP_006152733.1.99106 XP_006187333.1.101512 XP_006197687.1.17985 XP_006263674.1.47583 XP_006736071.1.47382 XP_006775565.1.95426 XP_006870671.1.41390 XP_006913256.1.64745 XP_006980534.1.50099 XP_007066495.1.26238 XP_007066496.1.26238 XP_007115084.1.24612 XP_007193111.1.59432 XP_007451772.1.90284 XP_007487419.1.35504 XP_007487423.1.35504 XP_007518855.1.11023 XP_007634345.1.28591 XP_007941666.1.48129 XP_007975385.1.81039 XP_008053354.1.4292 XP_008490354.1.100939 XP_008528881.1.77740 XP_008577314.1.73410 XP_008709297.1.72690 XP_008851519.1.79516 XP_008974029.1.60992 XP_009239142.1.23681 XP_009447188.1.37143 XP_010384342.1.97406 XP_010586556.1.64505 XP_010861675.1.44457 XP_010947528.1.22495 XP_010980316.1.51371 XP_011584395.1.59079 XP_011728288.1.29376 XP_011799601.1.43180 XP_011851860.1.47321 XP_011917444.1.92194 XP_012023657.1.66739 XP_012332991.1.9421 XP_012520022.1.63892 XP_012639828.1.48125 XP_012871402.1.60039 XP_014712516.1.49734 XP_014742010.1.99236 XP_014816016.1.91963 XP_014944989.1.54773 XP_015267748.1.55130 XP_015267749.1.55130 XP_015307148.1.63531 XP_015353348.1.40921 XP_015508750.1.82291 XP_015978765.1.101085 XP_016065883.1.3490 XP_017363361.1.71028 XP_017510265.1.32401 XP_017661645.1.3805 XP_017747718.1.44346 XP_017905543.1.57651 XP_017928404.1.51550 XP_019372477.1.87953 XP_019387864.1.79039 XP_019508121.1.44202 XP_019601945.1.88060 XP_019820947.1.53367 XP_020033618.1.5219 XP_020645957.1.8467 XP_020645958.1.8467 XP_020748621.1.74333 XP_020863519.1.61212 XP_020863521.1.61212 XP_021064182.1.100879 XP_021235530.1.32913 XP_021407464.1.53032 XP_021482897.1.76796 XP_021555286.1.83697 XP_424903.3.86415 ENSMUSP00000054490 ENSSSCP00000015028 ENSGGOP00000025497 ENSGGOP00000025497 ENSOANP00000020125 ENSRNOP00000022348

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