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Domain assignment for XP_011734168.1.29376 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_011734168.1.29376
Domain Number 1 Region: 6-94
Classification Level Classification E-value
Superfamily PDZ domain-like 3.81e-25
Family PDZ domain 0.00029
Further Details:      
 
Domain Number 2 Region: 286-315
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.000000000000563
Family LIM domain 0.001
Further Details:      
 
Domain Number 3 Region: 253-285
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.0000000156
Family LIM domain 0.00086
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_011734168.1.29376
Sequence length 330
Comment PREDICTED: PDZ and LIM domain protein 1 [Macaca nemestrina]; AA=GCF_000956065.1; RF=representative genome; TAX=9545; STAX=9545; NAME=Macaca nemestrina; AL=Scaffold; RT=Major
Sequence
MTTQQIVLQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSN
MTHLEAQNRIKGCTDNMTLTVARSEHKVWSPLVTEEGGKRHPYKMNLASEPQEVLHIGSA
HNRSAMPFTASPASSTTARVITNQYNNPAGLYSSENISNFNNALESKTAASGVEANSRPL
DHAQPPSSLVIDKESEVYKMLQEKQELNEPPKQSTSFLVLQEILESEEKGDPNKPSGFRS
VKAPVTKVAASIGNAQKLPMCDKCGTGIVGVFVKLRDHHRHPECYVCTDCGTNLKQKGHF
FVEDQIYCEKHARERVTPPEGYEVVTVFPK
Download sequence
Identical sequences A0A096P5Q9 A0A2K5UPI7 A0A2K6CWQ9 F6YRD0
ENSMMUP00000000614 9544.ENSMMUP00000000614 XP_001099155.1.72884 XP_005566074.1.63531 XP_011734168.1.29376 ENSPANP00000020684 ENSMMUP00000000614

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