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Domain assignment for XP_011849098.1.47321 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_011849098.1.47321
Domain Number 1 Region: 713-870
Classification Level Classification E-value
Superfamily C-terminal autoproteolytic domain of nucleoporin nup98 1.11e-56
Family C-terminal autoproteolytic domain of nucleoporin nup98 0.0000000265
Further Details:      
 
Domain Number 2 Region: 52-181
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 0.0000165
Family Tetraviridae-like VP 0.037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_011849098.1.47321
Sequence length 1726
Comment PREDICTED: nuclear pore complex protein Nup98-Nup96 isoform X1 [Mandrillus leucophaeus]; AA=GCF_000951045.1; RF=representative genome; TAX=9568; STAX=9568; NAME=Mandrillus leucophaeus; AL=Scaffold; RT=Major
Sequence
MFNKSFGTTFGGGTGGFGTTSAFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTSSFSQPATSTSTGFGFGTSTGTANTLFGTASTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTTGLFGSSPATSSATGL
FSSSTTNSGFAYGQNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFSKPFGQATTTQNTGF
SFGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQTNTGFGAV
GSTLFGNNKLTTFGSSTTSAPSFGTTSGGLFGFGTNTSGNSIFGSKPAPGTLGTGLGAGF
GTALGAGQASLFGNNQPKIGGPLGTGAFGAPGFNTTTATLGFGAPQAPVALTDPNASAAQ
QAVLQQHINSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPA
TRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKLVLKNLNNSNLFSPVNRD
SENLASPSEYPENGERFSFLSKPVDENHQQDGDEDSLVSRFYTNPIAKPIPQTPESAGNK
HNNSNSVDDTIVALNMRAALRNGLEGSSEETSFHDESLQDDREEIENNSYHMHPAGIVLT
KVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIVHIRRK
EVIVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPDRLADINYEGRLEAVSR
KQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEEHPSKSSTKKLKTAPLPPAGQTAP
LQMALNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVLDTMLEESMPEDQEPVSAS
THIASSLGINPHVLQIMKASLLTDEEDVDMALDQRFSRLPSKADTSQEICSPRLPISASH
SSKTRSLVGGLLQSKFTSGAFLSPSASVQECRTPRTASLMNIPSTSCWSVPPPLTSVFTI
PSPAPEVPLKTVGTRRQLGLVPREKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSG
EQLNGSHELENHQIADSMEFGFLPNPVAVKSLTESPFKVHLEKLSLRQRKPDEDMKLYQT
PLELKLKHSTVHVDELCPLIVPNPGVAVIHDYADWVKETSGDLPEAQIVKHWSLTWTLCE
ALWGHLKELDSQLNEPCEYIQILERRRAFSRWLSCTATPQIEEEVSLTHKSSPVEAVFSY
LTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADCFIQDERLR
IFALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTS
DSDRYACSPLPSYLEGSGCVIAEEQNSQAQLRDVCFHLLKLYSDSVREKAVRELLTRHCQ
LLETPESWAKETFLTQKLCVPAEWIHEAKAVRAHMESDKHLEALCLFKAGHWNRCHKLII
RHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLHHIQQVDC
SGYDLEQLHIKVTSLCSRIEQIQCYNAKDRLAQSDMAKRVANLLRVVLSLHHAPDRTSDS
TPDPQRVPLRLLAPHIGRLPMPEDYAMDELRSLTQSYLRELAVGSL
Download sequence
Identical sequences XP_011849098.1.47321

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