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Domain assignment for XP_011887580.1.92194 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_011887580.1.92194
Domain Number 1 Region: 218-281
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.0000000000000893
Family LIM domain 0.045
Further Details:      
 
Domain Number 2 Region: 278-344
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.0000000011
Family LIM domain 0.019
Further Details:      
 
Weak hits

Sequence:  XP_011887580.1.92194
Domain Number - Region: 182-221
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.0471
Family LIM domain 0.039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_011887580.1.92194
Sequence length 620
Comment PREDICTED: prickle-like protein 3 isoform X2 [Cercocebus atys]; AA=GCF_000955945.1; RF=representative genome; TAX=9531; STAX=9531; NAME=Cercocebus atys; AL=Scaffold; RT=Major
Sequence
MFARGSRRRRSGRAPPEAEDPDRGQPCNSCREQCPGFLLHGWRKICQHCKCPREEHAVHA
VPVDLERIMCRLISDFQRHSISDDDSGCASEEYAWVPPGLKPEQVYQFFSCLPEDKVPYV
NSPGEKYRIKQLLHQLPPHDSEAQYCTALEEEEKKELRAFSQQRKRENLGRGIVRIFPVT
ITGAICEECGKQIGGGDIAVFASRAGLGACWHPQCFVCTTCRELLVDLIYFYHAGKVYCG
RHHAECLRPRCQACDEIIFSPECTEAEGRHWHMDHFCCFECEASLGGQRYVMRQSRPHCC
ACYEARHAEYCDGCGEHIGLDQGQMAYEGQHWHASDRCFCCSRCGRALLGRPFLPRRGLI
FCSRACSLGSEPTAPGPGRRSWSAGTVTAPLAASTASFSAAEGASETTTKGTCTESAPAT
GPEEPSRFLRGAPHRHSMPELGLRSAPEPPPESPGQPNLRPDDSAFGRQSTPRVSFRDPL
VSEGGPRRTLSAPPAQRRRPRSPPPRAPSRHRHRHNHHHHHHHHHRHPSRRRHYQCDAGS
GSDSGSCSSSPSSSSSESSEDDGFFLGERIPLPPHLCRPMPAQDNATETFNSPSLSLPRD
SRPGMPRQTRQTRDKNCIVA
Download sequence
Identical sequences A0A2K5MSR6 A0A2K5WJ07 F6VGC9
ENSMMUP00000030313 ENSMMUP00000030313 XP_001105952.1.72884 XP_005593598.1.63531 XP_011887580.1.92194 9544.ENSMMUP00000030313

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