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Domain assignment for XP_011900479.1.92194 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_011900479.1.92194
Domain Number 1 Region: 713-870
Classification Level Classification E-value
Superfamily C-terminal autoproteolytic domain of nucleoporin nup98 1.18e-56
Family C-terminal autoproteolytic domain of nucleoporin nup98 0.0000000265
Further Details:      
 
Domain Number 2 Region: 52-181
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 0.0000212
Family Tetraviridae-like VP 0.037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_011900479.1.92194
Sequence length 1800
Comment PREDICTED: nuclear pore complex protein Nup98-Nup96 isoform X2 [Cercocebus atys]; AA=GCF_000955945.1; RF=representative genome; TAX=9531; STAX=9531; NAME=Cercocebus atys; AL=Scaffold; RT=Major
Sequence
MFNKSFGTTFGGGTGGFGTTSAFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTSSFSQPATSTSTGFGFGTSTGTANTLFGTASTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTTGLFGSSPATSSATGL
FSSSTTNSGFAYGQNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFSKPFGQATTTQNTGF
SFGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQTNTGFGAV
GSTLFGNNKLTTFGSSTTSAPSFGTTSGGLFGFGTNTSGNSIFGSKPAPGTLGTGLGAGF
GTALGAGQASLFGNNQPKIGGPLGTGAFGAPGFNTTTATLGFGAPQAPVALTDPNASAAQ
QAVLQQHINSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPA
TRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKLVLKNLNNSNLFSPVNRD
SENLASPSEYPENGERFSFLSKPVDENHQQDGDEDSLVSRFYTNPIAKPIPQTPESAGNK
HNNSNSVDDTIVALNMRAALRNGLEGSSEETSFHDESLQDDREEIENNSYHMHPAGIVLT
KVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIVHIRRK
EVIVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPDRLADINYEGRLEAVSR
KQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEEHPSKSSTKKLKTAPLPPAGQTAP
LQMALNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVLDTMLEESMPEDQEPVSAS
THIASSLGINPHVLQIMKASLLTDEEDVDMALDQRFSRLPSKADTSQEICSPRLPISASH
SSKTRSLVGGLLQSKFTSGAFLSPSASVQECRTPRTASLMNIPSTSCWSVPPPLTSVFTI
PSPAPEVPLKTVGTRRQLGLVPREKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSG
EQLNGSHELENHQIADSMEFGFLPNPVAVKSLTESPFKVHLEKLSLRQRKPDEDMKLYQT
PLELKLKHSTVHVDELCPLIVPNPGVAVIHDYADWVKETSGDLPEAQIVKHWSLTWTLCE
ALWGHLKELDSQLNEPCEYIQILERRRAFSRWLSCTATPQIEEEVSLTHKNSPVEAVFSY
LTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADCFIQDERLR
IFALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTS
DSDRYACSPLPSYLEGSGCVIAEEQNSQAQLRDVCFHLLKLYSDRHYDLNQLLEPRSITA
DPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSCV
REKAVRELLTRHCQLLETPESWAKETFLTQKLCVPAEWIHEAKAVRAHMESDKHLEALCL
FKAGHWNHCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYI
RVIEMLHHIQQVDCSGYDLEQLHIKVTSLCSRIEQIQCYNAKDRLAQSDMAKRVANLLRV
VLSLHHAPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDELRSLTQSYLRELAVGSL
Download sequence
Identical sequences A0A2K5M395
XP_011900479.1.92194

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