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Domain assignment for XP_011900481.1.92194 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_011900481.1.92194
Domain Number 1 Region: 730-876
Classification Level Classification E-value
Superfamily C-terminal autoproteolytic domain of nucleoporin nup98 4.32e-50
Family C-terminal autoproteolytic domain of nucleoporin nup98 0.0000000502
Further Details:      
 
Domain Number 2 Region: 52-181
Classification Level Classification E-value
Superfamily Positive stranded ssRNA viruses 0.0000177
Family Tetraviridae-like VP 0.037
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_011900481.1.92194
Sequence length 1762
Comment PREDICTED: nuclear pore complex protein Nup98-Nup96 isoform X4 [Cercocebus atys]; AA=GCF_000955945.1; RF=representative genome; TAX=9531; STAX=9531; NAME=Cercocebus atys; AL=Scaffold; RT=Major
Sequence
MFNKSFGTTFGGGTGGFGTTSAFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTSSFSQPATSTSTGFGFGTSTGTANTLFGTASTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTTGLFGSSPATSSATGL
FSSSTTNSGFAYGQNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFSKPFGQATTTQNTGF
SFGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQTNTGFGAV
GSTLFGNNKLTTFGSSTTSAPSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNTSGNSIF
GSKPAPGTLGTGLGAGFGTALGAGQASLFGNNQPKIGGPLGTGAFGAPGFNTTTATLGFG
APQAPVALTDPNASAAQQAVLQQHINSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAA
QKALTTPTHYKLTPRPATRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKL
VLKNLNNSNLFSPVNRDSENLASPSEYPENGERFSFLSKPVDENHQQDGDEDSLVSRFYT
NPIAKPIPQTPESAGNKHNNSNSVDDTIVALNMRAALRNGLEGSSEETSFHDESLQDDRE
EIENNSYHMHPAGIVLTKVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGD
VNLTNLNLDDIVHIRRKEVIVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSP
DRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKSQSPEVEQLGRVVELDSDMVDITQ
EPVLDTMLEESMPEDQEPVSASTHIASSLGINPHVLQIMKASLLTDEEDVDMALDQRFSR
LPSKADTSQEICSPRLPISASHSSKTRSLVGGLLQSKFTSGAFLSPSASVQECRTPRTAS
LMNIPSTSCWSVPPPLTSVFTIPSPAPEVPLKTVGTRRQLGLVPREKSVTYGKGKLLMDM
ALFMGRSFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKSLTESPFK
VHLEKLSLRQRKPDEDMKLYQTPLELKLKHSTVHVDELCPLIVPNPGVAVIHDYADWVKE
TSGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPCEYIQILERRRAFSRWLSCTAT
PQIEEEVSLTHKNSPVEAVFSYLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELL
TMQLVDWHQLQADCFIQDERLRIFALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYL
LPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQAQLRDVCFHL
LKLYSDRHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQ
LESEGLWEWAIFVLLHIDNSCVREKAVRELLTRHCQLLETPESWAKETFLTQKLCVPAEW
IHEAKAVRAHMESDKHLEALCLFKAGHWNHCHKLIIRHLASDAIINENYDYLKGFLEDLA
PPERSSLIQDWETSGLVYLDYIRVIEMLHHIQQVDCSGYDLEQLHIKVTSLCSRIEQIQC
YNAKDRLAQSDMAKRVANLLRVVLSLHHAPDRTSDSTPDPQRVPLRLLAPHIGRLPMPED
YAMDELRSLTQSYLRELAVGSL
Download sequence
Identical sequences XP_011900481.1.92194

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