SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_011929177.1.92194 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_011929177.1.92194
Domain Number 1 Region: 739-782
Classification Level Classification E-value
Superfamily CCHHC domain 3.92e-16
Family CCHHC domain 0.00069
Further Details:      
 
Domain Number 2 Region: 782-821
Classification Level Classification E-value
Superfamily CCHHC domain 0.00000000000000458
Family CCHHC domain 0.00064
Further Details:      
 
Domain Number 3 Region: 382-426
Classification Level Classification E-value
Superfamily CCHHC domain 0.000000000000183
Family CCHHC domain 0.0000978
Further Details:      
 
Domain Number 4 Region: 830-866
Classification Level Classification E-value
Superfamily CCHHC domain 0.000000000000196
Family CCHHC domain 0.0012
Further Details:      
 
Domain Number 5 Region: 427-462
Classification Level Classification E-value
Superfamily CCHHC domain 0.00000000000157
Family CCHHC domain 0.0014
Further Details:      
 
Domain Number 6 Region: 884-920
Classification Level Classification E-value
Superfamily CCHHC domain 0.0000000000017
Family CCHHC domain 0.0014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_011929177.1.92194
Sequence length 1064
Comment PREDICTED: suppression of tumorigenicity 18 protein isoform X1 [Cercocebus atys]; AA=GCF_000955945.1; RF=representative genome; TAX=9531; STAX=9531; NAME=Cercocebus atys; AL=Scaffold; RT=Major
Sequence
MSSTSTRKSLYTSVYRFMDAEAEDKTLRTRSKGTEVPMDSLIQELSVAYDCSMAKKRRAE
DPALGVPVNKRKSLLMKPRHYSPNADCQEDHSDRTEDDGPLETHDHSTAEEVMIKPMDES
LLSAAQENSSRKEDRYSCYQELVVKSLMHLGKFEKNVSVQTTSENLNDSGIQSLKAESDE
ADECFMIHSDDGRDKIDDSQPPFCSSDDNESNSESAENGWDSGSNFSEETKPPRVPKYVL
TDHKKDLLEVPEIKTEGDKFIPCENRCDSETERKDPQNAHAEPLDGNTQPSFPDVEEEDS
ESLAVMTEESSDLEKAKGNLSLLEQAIALQAERGCVFHNTYKELDRFLLEHLAGERRQTK
VIDMGGRQIFHNKHSPRPEKRETKCPIPGCDGTGHVTGLYPHHRSLSGCPHKVRVPLEIL
AMHENVLKCPTPGCTGRGHVNSNRNTHRSLSGCPIAAAEKLAMSQDKNQLDSPQTGQCPD
QAHRTRLVKQIEFNFPSQVITSPRATVSKEQEKFGKVPFDYASFDAQVFGKRPLIQTVQG
RKTPPFPESKHFSNPVKFPNRLPSAGAHTQSPGRASSYSYGQCSEDTHIAAAAAILNLST
RCREATDILSNKPQSLHAKGAEIEVDENGTLDLSMKKNRILDKAAPLTSSNTSIPTPSSS
PFKTSSILVNAAFYQALCDQEGWDTPINYSKTHGKTEEEKEKDPVSSLENLEEKKFPGEA
SIPSPKPKLHARDLKKELITCPTPGCDGSGHVTGNYASHRSVSGCPLADKTLKSLMAANS
QELKCPTPGCDGSGHVTGNYASHRSLSGCPRARKGGVKMTPTKEEKEDPELKCPVIGCDG
QGHISGKYTSHRTASGCPLAAKRQKENPLNGASLSWKLNKQELPHCPLPGCNGLGHVNNV
FVTHRSLSGCPLNAQAIKKGKVSEELMTIKLKATGGIESDEEIRHLDEEIKELNESNLKI
EADMMKLQTQITSMESNLKTIEEENKLIEQNNESLLKELAGLSQALISSLADIQLPQMGP
ISEQNFEAYVNTLTDMYSNLERDYSPECKALLESIKQAVKGIHV
Download sequence
Identical sequences XP_011929170.1.92194 XP_011929171.1.92194 XP_011929173.1.92194 XP_011929174.1.92194 XP_011929175.1.92194 XP_011929176.1.92194 XP_011929177.1.92194 XP_011929178.1.92194

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]