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Domain assignment for XP_012301870.2.9421 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_012301870.2.9421
Domain Number 1 Region: 353-478
Classification Level Classification E-value
Superfamily PX domain 0.00000000000000283
Family PX domain 0.0075
Further Details:      
 
Domain Number 2 Region: 1121-1149
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.00000331
Family Retrovirus zinc finger-like domains 0.0042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_012301870.2.9421
Sequence length 1179
Comment LOW QUALITY PROTEIN: zinc finger CCHC domain-containing protein 2 [Aotus nancymaae]; AA=GCF_000952055.2; RF=representative genome; TAX=37293; STAX=37293; NAME=Aotus nancymaae; AL=Scaffold; RT=Major
Sequence
MLRMKLPLKPTHPAEPPPXAEEPEADARPGAKAXPRRRRDCRPPPPXAAGPPRGPLPPPP
PPSPRPGLGPPVAGGAAAGAGMPGCGGGPXAVLREQERVYEWFGLVLGSAQRLEFMCGLL
DLCNPLELRFLGSCLEDLARKDYHYLRDSEAKANGLSDPGPLADFREPAVRSRLIVYLAL
LGSENREAAGRLHRLLPQVDSVLKSLRAARGKGSRGGAEDERGEDGDGEQDPEKDGSGPE
GSGAEPRTGGGLGSRAQEELLLLFTMASLHPAFSFHQRVTLREHLERLRAALRRGPEDAE
VEVEPCKFASPRAQNDSAHGDYMQKNESSLIEQAPIPQDGLTLAPHRVQREAVHIEKIML
KGVQRKRADKYWEYTFKVNWSDLSVTTVTKTHQELQEFLLKLPKELSSETFDKTILRALN
QGSLKREERRHPDLEPILRQLFSSSSQAFLQSQKVHSFFQSISSDSLHSLNTLQSSLKTS
KILEHLKEDSSEASSQEEDVLQHAIIHKKHAGKSPIVNTIGTSCSPLDGLTMQYSEQNGI
VDWRKQSCTAIQHPEHCVTSAEQHSAEKRSLSSINKKKGKPQTEKEKIKKTDNRLNSRIN
GIRLSTPQHAHGGTVKDVNLDIGSGHDTCGETSSESYSSPSSPRHDGRESFESEEEKDRD
TDSNSEDSGNPSTTRFTGYGSVNQTVSIKPPVQIASLGNENGNLLEDPLNSPKYQHISFM
PALHCVMHNGAQKSEVVVPAPKSADGKTIGMLVPSPVAISAIRESANSTPVGILGPTAST
GESEKHLELLASPLPIPSTFLPHSSTPALHLTVQRLKLPPPQGSSESCTVNIPQQPPGSL
SIGSPNTAFIPIHNPGSFPGSPVATTDPITKSASQVVGLNQMVPQIEGNTGTVPQPTNVK
VVLPAAGLSAAQPPASYPLPGSPLAAGVLPSQNSGVLSTAATSPQPASAGISQAQATVPP
AVPTHTPGPAPSPSPALTHSTAQSDSTSYISAVGNTNANGTVVPPQQLGSGPCGSCGRRC
SCGTNGSLQLNSYYYPNPMPGPMYRVPSFFTLPSICNGSYLNQAHQSNGNQLPFFLPQTP
YANGLVHDPVMGSQANYGMQQMAGFGRFYPVYPAPNVVANTSGSGPKKNGNVSCYNCGVS
GHYAQDCKQSSMEANQQGTYRLRYAPPLPPSNDTLDSAD
Download sequence
Identical sequences XP_012301870.2.9421

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