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Domain assignment for XP_012321255.1.9421 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_012321255.1.9421
Domain Number 1 Region: 39-130
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 1.24e-37
Family SCAN domain 0.00007
Further Details:      
 
Domain Number 2 Region: 350-407
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.38e-26
Family Classic zinc finger, C2H2 0.0031
Further Details:      
 
Domain Number 3 Region: 396-448
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.31e-20
Family Classic zinc finger, C2H2 0.0033
Further Details:      
 
Domain Number 4 Region: 312-364
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.37e-18
Family Classic zinc finger, C2H2 0.0042
Further Details:      
 
Domain Number 5 Region: 480-530
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.78e-18
Family Classic zinc finger, C2H2 0.0052
Further Details:      
 
Domain Number 6 Region: 210-257
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.000000392
Family KRAB domain (Kruppel-associated box) 0.0079
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_012321255.1.9421
Sequence length 538
Comment zinc finger protein with KRAB and SCAN domains 3 isoform X1 [Aotus nancymaae]; AA=GCF_000952055.2; RF=representative genome; TAX=37293; STAX=37293; NAME=Aotus nancymaae; AL=Scaffold; RT=Major
Sequence
MAREFSERAALDAQSTEEQTELLVIKVEEEEAGFPSSPDLGPERSRQRFRGFRFPEAAGP
REALSRLRELCQQWLQPEMHSKEQILELLVLEQFLTILPGSVQSWVREQHPESGEEVVLL
LEYLERQLDEPALQVPGGDQGQELPCCKMALWPPSPESQSSQAQLMKALLKHESLGSQPL
QDRVLQVPVFAHGGYCRGDAVVASRVTPESQGLLKVEDVALTLPPEWTQQDSSQVNLCRD
EKQENHGSLVFLGGEIQTKSRDLLPAKELPEKEHGKISCHLSEDIAQIPTCAEAGEQEGR
LQRKQKSATGGRRHICHECGKSFAQSSGLSKHRRIHTGEKPYECEECGKAFIGSSALIIH
QRVHTGEKPYECEECGKAFSHSSDLIKHQRTHTGEKPYECDDCGKTFSQSCSLLEHHRIH
TGEKPYQCNMCGKAFRRSSHLLRHQRIHTGDKNVQEPEQGDAWKSRMESQLENVETPMSY
KCDECERSFTQNSGLIEHKKIHTGEKPYQCNACGKGFTRISYLVQHQRSHTGRNILSQ
Download sequence
Identical sequences A0A2K5D9D7
XP_012321251.1.9421 XP_012321252.1.9421 XP_012321253.1.9421 XP_012321254.1.9421 XP_012321255.1.9421

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