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Domain assignment for XP_012403314.1.9362 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_012403314.1.9362
Domain Number 1 Region: 248-316
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000272
Family Laminin-type module 0.022
Further Details:      
 
Domain Number 2 Region: 429-476
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000502
Family Laminin-type module 0.0069
Further Details:      
 
Domain Number 3 Region: 377-426
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000837
Family Laminin-type module 0.0087
Further Details:      
 
Domain Number 4 Region: 314-379
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000698
Family Laminin-type module 0.037
Further Details:      
 
Domain Number 5 Region: 75-180
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 0.00000132
Family N-terminal domain of xrcc1 0.058
Further Details:      
 
Domain Number 6 Region: 532-578
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000126
Family Laminin-type module 0.031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_012403314.1.9362
Sequence length 1170
Comment PREDICTED: laminin subunit beta-3 [Sarcophilus harrisii]; AA=GCF_000189315.1; RF=representative genome; TAX=9305; STAX=9305; NAME=Sarcophilus harrisii; AL=Scaffold; RT=Major
Sequence
MWLLLMLMALPGLHAQQACSRGACYPPVGDLLVGRTRFLKASSTCGMTKPETYCTPYGEW
KMKCCKCDSRLPHGYNSHRVENVLSSSGPTRWWQSQNDVSPVSLQLDLDRKFQLQDIMLD
LQGPLPAGMLIEHSPDFGKTWKVYQYLAPNCAATFPQLRQGRPQSWQDVRCQPLSTQHTG
PNRGGKVHLNLLDLASGIPATQSQKIHELGEITNLRINFTRLASVPQRGYHPPSAYFAVS
QLRLQGSCFCHGHADSCAPLPGIPADPSARVQVHEVCVCQHNTAGLTCDRCAPFYNNRPW
KAADDQNPHECQRCECNGHSETCHFDPAVFAASQGVSGGVCDNCQDHTEGNNCERCQLHY
FRNRRPGAPIQETCIPCECDPDGAVPGAPCDPLTGQCVCKENVKGERCDLCKPGFTGLTY
TNPQGCTRCDCSILGSRRDMPCDEETGRCLCLPNVVGPKCDQCAPNYWKVASGRGCEPCN
CDPHNSYSPQCNQFTGQCQCREGFDGPTCSAASIRQCPDRSYGDSGTACRACDCDFRGTE
GPGCDKTTGQCLCRPGFVGPRCDQCQRGFCDNYPICVVCHSCFQTFDRNIREEALRLRSL
LNITAGLRPGSGLGDHVLGPRIGEAENSIRQIHAILRTPSVTEQEITEVANIIFSFRRTL
QNLQTNLPLEEETDSLLEELENLDRSLKLLLIQYQNKREQFERISSTDPSGSFRMLNSAY
QTSSQAVQRIASSSNLLLQVHDSRKEAERLERQLEGSGSAGGSQLQTLRQQMASFPNLTP
TINKICGTTRQETCTPGQCQGITCPRDNGTACGADCRGILRQAGGAFRIAKQMSQQLQDF
NAQLQQTRQMIREAEEAATQIQTDAQRLEIQVSNSRSQMEEDVRRTRLLIQQVRDFLTDP
STDAATIQEISESVLALWLPTDSATVLRKMNEIQAIAARLPNVDLILSQTKQDITRARKL
QEEAELARSRAITVEGQVEDVVENLRQGMVALQEAEDTMLGTSRSLGLLQDRITEVQQVL
APTERMVTGMTEQLTSFRDRIEQLRHSIGEQREQSAQAQEIAQGASEHALSAQQGFERVK
QKYKELKNRMGQSPMLGEQGSRILNVKSEAEELFEETMTMMDRMKDMEVELLMGSQDIIR
RSADLTGLEKRVEKIRDHINERVLYYATCQ
Download sequence
Identical sequences G3W8A1
XP_012403314.1.9362 ENSSHAP00000011656

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