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Domain assignment for XP_012506861.1.63892 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_012506861.1.63892
Domain Number 1 Region: 44-131
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 7.78e-37
Family SCAN domain 0.0000545
Further Details:      
 
Domain Number 2 Region: 461-517
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.13e-26
Family Classic zinc finger, C2H2 0.0037
Further Details:      
 
Domain Number 3 Region: 657-713
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.11e-25
Family Classic zinc finger, C2H2 0.0039
Further Details:      
 
Domain Number 4 Region: 600-657
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.84e-25
Family Classic zinc finger, C2H2 0.0045
Further Details:      
 
Domain Number 5 Region: 405-461
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.72e-25
Family Classic zinc finger, C2H2 0.0048
Further Details:      
 
Domain Number 6 Region: 544-601
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.47e-23
Family Classic zinc finger, C2H2 0.005
Further Details:      
 
Domain Number 7 Region: 702-754
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.4e-20
Family Classic zinc finger, C2H2 0.0053
Further Details:      
 
Domain Number 8 Region: 165-224
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 3.01e-18
Family KRAB domain (Kruppel-associated box) 0.002
Further Details:      
 
Domain Number 9 Region: 366-418
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.92e-16
Family Classic zinc finger, C2H2 0.014
Further Details:      
 
Domain Number 10 Region: 507-539
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000258
Family Classic zinc finger, C2H2 0.0044
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_012506861.1.63892
Sequence length 761
Comment PREDICTED: zinc finger protein 287 [Propithecus coquereli]; AA=GCF_000956105.1; RF=representative genome; TAX=379532; STAX=379532; NAME=Propithecus coquereli; AL=Scaffold; RT=Major
Sequence
MLASSKRMSTSSRSQILLMRKPDKAQIGHHSVGKETLTSRLLRDTETCRQNFRNFPYPDL
AGPRKALSQLRELCLKWLRPEIHSKEQILELLVLEQFLTILPGEVRTWVKSQYPESSEEA
VTLVEDLTQILEEEAPQNSALSQETPEEDPRGKHTFQTGWLNDLVTKESMTFKDVAVDIT
KEDWELMRPVQKELYKTVTLQNYWNMVSLGLTVYRPTVIPILEEPWMVIKEILEGPSPEW
ETEAQVCTPVQDISKLTKDRTQTIKLEESYDFDDRLQRQATDTFWKIPTNERDFILKSVP
SQEDDPTEEYLSKYDIYGNNFEKHSNLILQFDTQLDNKTSMYDEGSTAFNHVSYGVVHGK
ILPGDKPYKCNVCGKKFRKYPSLLKHQSSHAKEKSYECEECGKEFRHISSLIAHQRMHTG
EKPYECHQCGKAFSQRAHLTIHQRIHTGEKPYKCDDCGKDFSQRAHLTIHQRTHTGEKPY
KCLECGKTFSHSSSLINHQRVHTGEKPYICNECGKTFSQSTHLLQHQKIHTGKKPYKCNE
CWKVFSQSTYLIRHQRIHSGEKCYKCNECGKAFAHSSTLIQHQTTHTGEKSYICNICGKA
FSQSANLTQHHRTHTGEKPYKCSVCGKAFSQSVHLTQHQRIHNGEKPFKCNICGKAYRQG
ANLTQHQRIHTGEKPYKCNECGKAFIYSSSLNQHQRTHTGERPYKCNECDKDFSQRTCLI
QHQRIHTGEKPYACRICGKTFTQSTNLIQHQRVHTGARHRN
Download sequence
Identical sequences A0A2K6GDE1
XP_012506859.1.63892 XP_012506861.1.63892

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