SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_012509083.1.63892 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_012509083.1.63892
Domain Number 1 Region: 255-312
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.92e-25
Family Classic zinc finger, C2H2 0.0034
Further Details:      
 
Domain Number 2 Region: 311-368
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.33e-24
Family Classic zinc finger, C2H2 0.0056
Further Details:      
 
Domain Number 3 Region: 2-63
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 3.14e-22
Family KRAB domain (Kruppel-associated box) 0.0016
Further Details:      
 
Domain Number 4 Region: 368-424
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.74e-21
Family Classic zinc finger, C2H2 0.0064
Further Details:      
 
Domain Number 5 Region: 409-461
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.23e-21
Family Classic zinc finger, C2H2 0.0031
Further Details:      
 
Domain Number 6 Region: 123-175
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000111
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 7 Region: 210-269
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000298
Family Classic zinc finger, C2H2 0.0073
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_012509083.1.63892
Sequence length 470
Comment PREDICTED: zinc finger protein 772 isoform X3 [Propithecus coquereli]; AA=GCF_000956105.1; RF=representative genome; TAX=379532; STAX=379532; NAME=Propithecus coquereli; AL=Scaffold; RT=Major
Sequence
MDPIQGQVNFEDVFVYFSQDEWQLLDEAQRLLYRDVMLENFVLMASLGQASSMSHVIASL
EQGSEPWVPDWVDVTPAIARGTLGESGPGCHGMEYEEIPFEQSISREGWSQMRTPKEGFS
AKKVHTCETCGLVLKDILHLAEHQETYPGQKPYKCVACGKQFWFSTNLHQHQKQHSGERH
FRRGDSRAFSVNSCPVQPSEMPFMTGEGCKDFSTSSSFFQHHAPHSEWKPHGNTKGEEAF
HSGQRHYKCSECGKAFSRKDSLVQHQRVHTGERPYECGECGKTFSRKPILAQHQRIHTGE
MPYECGICGKVFNHSSNLIVHQRVHTGARPYKCSECGKAYSHKSTLVQHESIHTGERPYE
CSECGKYFGHKYRLIKHWSVHTGARPYECIACGKFFSQSSDLIAHQRVHNGEKPYVCSEC
GKAFSHKHVLVQHHRIHTGERPYKCSECGKAFRQRASLIRHWKIHSGERS
Download sequence
Identical sequences XP_012509083.1.63892

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]