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Domain assignment for XP_012582871.1.23501 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_012582871.1.23501
Domain Number 1 Region: 467-672
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.03e-37
Family Laminin G-like module 0.0012
Further Details:      
 
Domain Number 2 Region: 684-875
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.43e-37
Family Laminin G-like module 0.0057
Further Details:      
 
Domain Number 3 Region: 879-1059
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 8.2e-37
Family Laminin G-like module 0.0023
Further Details:      
 
Domain Number 4 Region: 281-450
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.24e-34
Family Laminin G-like module 0.0024
Further Details:      
 
Domain Number 5 Region: 10-190
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 4.57e-32
Family Laminin G-like module 0.0029
Further Details:      
 
Domain Number 6 Region: 1092-1232,1261-1303
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.06e-30
Family Laminin G-like module 0.000000245
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_012582871.1.23501
Sequence length 1507
Comment PREDICTED: neurexin-1-beta isoform X4 [Condylura cristata]; AA=GCF_000260355.1; RF=representative genome; TAX=143302; STAX=143302; NAME=Condylura cristata; AL=Scaffold; RT=Major
Sequence
MGTALLQRGGCFLLCLSLLLLGCWAELGSGLEFPGAEGQWTRFPKWNACCESEMSFQLKT
RSARGLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDGAWHNVRIR
RQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSGLFIGGLPPELRAAALKLTLASVREREPF
KGWIRDVRVNSSQALPVDSGEVKLDDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQ
AVCDCSRTGFRGKDCSQEDNNVEGLAHLMMGDQGKSKGKEEYIATFKGSEYFCYDLSQNP
IQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNG
KFNDNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP
STADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLD
PITFETPESFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDF
FAIEMLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTA
PGESEILDLDDELYLGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMA
EVQSTAGVKPSCSRETAKPCLSNPCKNNGVCRDGWNRYVCDCSGTGYLGRSCEREATVLS
YDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTV
NLDCIRINCNSSKGPETLFAGNNLNDNEWHTVRVVRRGKGLKLTVDDQPAMTGQMAGDHT
RLEFHNIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFR
NIIADPVTFKTKSSYVALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKG
YLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGARNL
DLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGC
EGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYKWP
PNDRPSTRADRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNVGTDDIAI
EESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGNNDNERLAIARQRIPYRLGR
VVDEWLLDKGRQLTIFNSQATIIIGGKEQGQPFQGQLSGLYYNGLKVLNMAAENDANIAI
MGNVRLVGEVPSSMTTESTATAMQSEMSTSIMETTTTLATSTARRGKPPTKEPVSQTTDD
ILVASAECPSDDEDIDPCEPSSGGLANPTRAGGREPYPGSAEVIRESSSTTGMVVGIVAA
AALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQPSSAKSANKNKKN
KDKEYYV
Download sequence
Identical sequences XP_012582871.1.23501

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