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Domain assignment for XP_012677498.1.3086 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_012677498.1.3086
Domain Number 1 Region: 841-1021
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 3.82e-37
Family Laminin G-like module 0.0014
Further Details:      
 
Domain Number 2 Region: 190-406
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.13e-34
Family Laminin G-like module 0.0039
Further Details:      
 
Domain Number 3 Region: 434-635
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 3.35e-34
Family Laminin G-like module 0.00069
Further Details:      
 
Domain Number 4 Region: 647-837
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.78e-33
Family Laminin G-like module 0.0063
Further Details:      
 
Domain Number 5 Region: 1054-1235
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.44e-32
Family Laminin G-like module 0.000000792
Further Details:      
 
Domain Number 6 Region: 8-163
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 9.32e-28
Family Laminin G-like module 0.0062
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_012677498.1.3086
Sequence length 1439
Comment PREDICTED: neurexin-2-beta [Clupea harengus]; AA=GCF_000966335.1; RF=representative genome; TAX=7950; STAX=7950; NAME=Clupea harengus; AL=Scaffold; RT=Major
Sequence
MCLLLSARAIEFGGAPGQWARYARWEAGAVGELSFSLKTNVSKALVLYLDDGGNCDFLEL
LVAGGHLQLRFAIHCAEPAMLHMETRVSDDRWHMVLLTRNYRETMLMVDGETKMAEVRSK
RKEMAVVSDLFVGGIPPDVRLSALTSSTVKYEPPFLGLISNLKVGEMPPTLVNSQGIQSD
LEYLCTKQNPCLNGGFCSIQFGEVHCDCSLTRFKGKYCKEEEYAVEGLAHLTLNNQGMGK
GREESVATFKGNEFFCYDLSLTPIQSSTDEITLSFRTLQRNGLMLHTGKSADYVNLSLKS
GAVWLVINLGSGAFEALVEPVNGKFNDNTWHDVRVTRNLRQHAGIGHAMVTISVDGILTT
TGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCLKDVVYKNNDFKLELSRLAI
EREPKITLYGDLVFRCEDVAALDPVTFETPESYIALPKWDTKKTGSISFDFRTTEPSGLL
LFSHGKIQNPNEQRVARDLKADYFAMELLDGYLFLLMDMGSGSIKLKASNKKVNDGEWCH
VDFQREGRKGSISVNSRTMPFNSNEGSDFLDLDGDMFLGGLPELRQDMVLPPEVWTALLN
YGYVGCVRDLFIDGKSRDVRRLAEIQSTPGVSSFCTRELQKRCSSAPCANGGLCKEGWNR
YVCDCTGTGYLGPNCEIEATVLSYDGSMYLKILMPRTMHTEAEDVALRFMSQRAYGLLMA
TTSKESADTLRLELDGGRVKLTVNLDCIRIDCNLSKGPEMLYAGQKLNDNEWHMVKVMRR
GKNLQLTVDNITTEGQMTGAHTRLEFHNIETGIMTERRFISVVPSNFIGHLQGLTVNGVP
YLDQCKNGDISHCELNARFGMRHIIADPVIFRSKGSYLALATLQAYTSMHLFFQFKTTTA
EGLLLFNSGDGSDFIVVELVKGYIHYVFNLGNGPSLMKGNSDKPLNDNQWHNVVVSRDNN
NVHTLKIDSRTVTQHSNGARNLDLKGELYIGGVAKNMYNSLPKLIASRDGYQGCLASVDL
NGRLPDLIADALHRVGQVERGCDGPSTTCAEDSCSNLGVCLQQWEGFSCDCTMTSYGGTY
CSDPGTTYIFGRGGALITYTWPPNDRPSTRADRLAVGFSTQLKDAVLVRVESAQGLGDYL
EVHIERGKVGVIFNVGTDDISIEESAVMVSDGKYHVVRFTRSGGNATLQVDNQPVIERFP
SGRQLTIFNSQAFIKIGGGEKGRHFQGQISGLYYNGLQVLKLAAEGNPNVQAQGNLRLVG
DVPSVLATDTTATTPLADMSTTIMETTTTMATTTTRKQRSPTMRDSVTQNTDDLLVASAE
CPSDDEDLEECEPGNGLLSNPSSPDRGPPGAVEVIRESSSTTGMVVGIVAAAALCILILL
YAMYKYRNRDEGSYQVDQSRNYISNSATQSNGTLVKEKQPGTAKTTTKNKKNKDKEYYV
Download sequence
Identical sequences XP_012677498.1.3086

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