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Domain assignment for XP_012823713.1.99540 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_012823713.1.99540
Domain Number 1 Region: 25-516
Classification Level Classification E-value
Superfamily Sema domain 1.31e-172
Family Sema domain 0.000000000182
Further Details:      
 
Domain Number 2 Region: 512-563
Classification Level Classification E-value
Superfamily Plexin repeat 0.0000000000349
Family Plexin repeat 0.0018
Further Details:      
 
Domain Number 3 Region: 580-657
Classification Level Classification E-value
Superfamily Immunoglobulin 0.000000000506
Family I set domains 0.035
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_012823713.1.99540
Sequence length 695
Comment PREDICTED: sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F isoform X3 [Xenopus tropicalis]; AA=GCF_000004195.3; RF=representative genome; TAX=8364; STAX=8364; NAME=Xenopus tropicalis; strain=Nigerian; AL=Chromosome; RT=Major
Sequence
MLVSALPPLLLLLLNLPPCVRTTRPPRVYLSYRDLMESRSARSFTFGFNTSDYRILLLDQ
DQDRMYVGSRDYVLSLDLGNINREPLIIHWPAPLNRHKECLMAGRGRVDECYNYLRVIQP
LNRTHLYACGTGAYQPQCAVIYRGWRSEDYVFRIVPASLESGKGRCPYDPKQENMATLID
GVLYAGVQVDYMGTDSAIFRTMGHKPPIRTEQYDSRWLNDPLFVGSLVVSESSFKEDDKL
YILFRERSLEGENGPALVSRIARVCLNDEGGLRSLVGKWTSYLKARLVCSVIGQDGVETS
FDQLRDVFIQPTHDKQNPLIYGVFTTLGSVFRGSAVCVYSLADVRAVFNGPFAHKEGHGY
QMTAYSGKTPYPRPGACAGGFSVPRNRSSRNFGEDVLRFVRTHPLMYSSVYPVNRRPLLL
LSDASYTYTSIAVDRVPAADGEYTVLFLGTDRGTVQKVMILPRGTKETESITLEEVEVFK
VPSPIRNLRISSKRHQLYVSSDVGVTQLSLHRCGRYGDSCADCCLARDPYCAWDGKGCVR
YTPSPSRRSRRQDVKHGDPLRQCRGYNTQVDRGIAERLQISVEGGSAYLQCDTHSPLESV
TWLLQRDGSQHRREVRLSAIDGGAVLRSVQASDAGVYTCTGTENGFRRSRAKIRLNVLPR
DLLEKLTAAPTLAPMAAQCPPPRRPRPRPSHTDRN
Download sequence
Identical sequences Q6DFQ0
NP_001006924.1.99540 XP_012823713.1.99540 gi|49903346|gb|AAH76684| gi|55742366|ref|NP_001006924| ENSXETP00000049036

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