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Domain assignment for XP_012873108.1.60039 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_012873108.1.60039
Domain Number 1 Region: 81-360
Classification Level Classification E-value
Superfamily L domain-like 1.87e-52
Family Ngr ectodomain-like 0.0015
Further Details:      
 
Domain Number 2 Region: 417-497
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000156
Family Fibronectin type III 0.0027
Further Details:      
 
Weak hits

Sequence:  XP_012873108.1.60039
Domain Number - Region: 34-78
Classification Level Classification E-value
Superfamily L domain-like 0.000136
Family Ngr ectodomain-like 0.0086
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_012873108.1.60039
Sequence length 660
Comment PREDICTED: leucine-rich repeat transmembrane protein FLRT2 [Dipodomys ordii]; AA=GCF_000151885.1; RF=representative genome; TAX=10020; STAX=10020; NAME=Dipodomys ordii; AL=Scaffold; RT=Major
Sequence
MGLQTTKWPSHGSFPLKSWLLVFLGLCSQASQLLACPSVCRCDRNFVYCNERSLTSVPLG
IPEGVTVLYLHNNQINNAGFPAGLHHVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENN
IQTISRAALAQLLKLEELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPV
DLQELRVDENRIAVISDMAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLTKLKEFSIVRN
SLSRPPPDLPGTHLIRLYLQDNQINHIPLTAFSNLRKLERLDISNNQLRMLTQGVFDNLS
NLKQLTARNNPWFCDCSIKWVTEWLKYIPSSLNVRGFMCQGPEQVRGMAVRELNMNLLSC
PATTPGLPLFTPAPTTLLPTTQPPTLSVPTPSRGHTPPAPTTSKPPTIPDWDGRERATPP
ISERIQLSIHFVNDTSIQVSWLSLFTVMAYKLTWVKMGHSLVGGIVQERIVSGEKQHLSL
VNLEPRSTYRICLVPLDAFNYRTVEDTICSEATTLASYLNNGSNTASSHEQTTSHSMSSP
FLLAGLIGGAVIFVLVVLLSVFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNSIL
EMTETSFQIVSLNNDQLLKGDFRLQPIYTPNGGINYTDCHIPNNMRYCNSSVPDLEHCHT
Download sequence
Identical sequences A0A1S3F8X4
XP_012873108.1.60039 ENSDORP00000003719 ENSDORP00000003719

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