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Domain assignment for XP_012885455.1.60039 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_012885455.1.60039
Domain Number 1 Region: 199-438
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 3.41e-70
Family Nuclear receptor ligand-binding domain 0.000000000619
Further Details:      
 
Domain Number 2 Region: 88-174
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.12e-28
Family Nuclear receptor 0.0000957
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_012885455.1.60039
Sequence length 440
Comment PREDICTED: oxysterols receptor LXR-alpha isoform X2 [Dipodomys ordii]; AA=GCF_000151885.1; RF=representative genome; TAX=10020; STAX=10020; NAME=Dipodomys ordii; AL=Scaffold; RT=Major
Sequence
MSLWLEASGPVVSPDSAVELWEPDTQDASSQAQGGSTFLREDSRMPPSAGGPLGLRLEAE
ERTALLTEPTELRPQKRKKGPAPKMLGNELCSVCGDKASGFHYNVLSCEGCKGFFRRSVI
KGARYVCHSGGHCPMDTYMRRKCQECRLRKCRQAGMREECVLSEEQIRLKKLKRQEEEQA
QTTSVPPRASSPPQVLPQLSPEQLGMIEKLVAAQQQCNRRSFSDRLRVTPWPMAPDPQSR
EARQQRFAHFTELAIVSVQEIVDFAKQLPGFLQLSREDQIALLKTSAIEVMLLETSRRYN
PGSESITFLKDFSYNREDFAKAGLQVEFINPIFDFSRAMNELQLNDAEFALLIAISIFSA
DRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSVHSEQVFA
LRLQDKKLPPLLSEIWDVHE
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Identical sequences A0A1S3G9T5
XP_012885455.1.60039 ENSDORP00000007260 ENSDORP00000007260

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