SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_012947088.1.99704 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_012947088.1.99704
Domain Number 1 Region: 441-646
Classification Level Classification E-value
Superfamily ARM repeat 0.000000152
Family MIF4G domain-like 0.088
Further Details:      
 
Domain Number 2 Region: 5-151
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 0.00000397
Family APC10-like 0.032
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_012947088.1.99704
Sequence length 936
Comment PREDICTED: centrosomal protein of 104 kDa isoform X2 [Anas platyrhynchos]; AA=GCF_000355885.1; RF=representative genome; TAX=8839; STAX=8839; NAME=Anas platyrhynchos; breed=Pekin duck; AL=Scaffold; RT=Major
Sequence
MPHKIGFIVVSSSGHEDGFSAKELMVHAPTVNGWRSPRLCQYPQEIVLQLVERCRIRKLQ
LLAHQYMISSKIEFYISESLPEYFAPYQSERFHRLGYVPLSDNEKTGFKARELKSVYMDA
VGQYLKLIFHKNYVNKYNLYSQVALVAINIIGDPADYSHDSNNNPSREKLIDHYLGSKSD
DPALDGTYLGKSDFISPLDDLAFDMYQDPEVAQIIRRLDEKKREAVHHERYDYAKKLKQA
IADLQKVGERLGRYEVEKRYAVEKEDYDLAKKKKQQMEAYRLKVYQQLQLHNLLDAELMI
RKPAELPLESMIYANIKATNSPSCEQIEPEKEEVWNAESLLEEKAGQPASPEPIFAHQSS
PPAVAHPTTSREAFPKENVEFLPYDERPLPAVRKHSEEAITYLEPEMTEGDINNPPRSGI
PGEPEPLTEKALREASPAIEVFGEALVSGAYSKTWSYREDALLAVYQKLMEMSVSTPKED
LKNMMRAAIFLVFQASLKLLKMIVTQYIPKHKLGKQETSHCVEKTLPSLLSRTGDSSSRL
RLVASNFIQEMALCSEVKPLQIVPVHLVQPLKPNSPIHLAMSQVELVECLLKDMGTENSG
FTISNVMKFATGALEHRVYEVRDVALRIIFDMYRKHKAAILEYLPPDDASIRKTVLYKTL
FDGFAKIDGKLSDAEIRAQKKAATEEAEKQKKEEIKVLQDQLAALKEIQAEVQAGKEMES
DFQKPKDQGYPVNRSPQSAAAEIPDDHSSVANYLDNLCIFCGERDESFTDEGLDLHYWKH
CPMLTRCEHCRQVVEIASLTEHLLTECDKKDSFGKCQRCSEALPKDELPKHIKSKICNAA
KPEQVANHCPLCHDNFAPGEEAWKSHLMGKDGCKMNPRRLPTINKTLLVQPGKIGGHYLR
KPDPSGAKARPPSMGSKIPTPRGGPNKGTGKTYSKR
Download sequence
Identical sequences XP_012947088.1.99704

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]