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Domain assignment for XP_012957878.1.99704 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_012957878.1.99704
Domain Number 1 Region: 80-360
Classification Level Classification E-value
Superfamily L domain-like 7.37e-53
Family Ngr ectodomain-like 0.00094
Further Details:      
 
Domain Number 2 Region: 419-518
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000449
Family Fibronectin type III 0.003
Further Details:      
 
Weak hits

Sequence:  XP_012957878.1.99704
Domain Number - Region: 35-78
Classification Level Classification E-value
Superfamily L domain-like 0.000408
Family Ngr ectodomain-like 0.0092
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_012957878.1.99704
Sequence length 662
Comment PREDICTED: leucine-rich repeat transmembrane protein FLRT2 [Anas platyrhynchos]; AA=GCF_000355885.1; RF=representative genome; TAX=8839; STAX=8839; NAME=Anas platyrhynchos; breed=Pekin duck; AL=Scaffold; RT=Major
Sequence
MGFWTKMWPTDWAVLIKSWLIFSLGLYMQVSKTVACPKVCRCDRNFVYCNERSLTSVPLG
IPEGVTVLYLHNNQINNAGFPAELHNVQSVHTVYLYGNQLDEFPMNLPKNVRVLHLQENN
IQTISRAALAQLLKLEELHLDDNSISTVGVEDGAFREAISLKLLFLSKNHLSSVPVGLPV
DLQELRVDENRIAVISDLAFQNLTSLERLIVDGNLLTNKGIAEGTFSHLSKLKEFSIVRN
SLTYPPPDLPGTHLLRLYLQDNQITHIPLTAFSKLHKLERLDISNNQLRMLVKGVFDNLH
NLRQLTVRNNPWLCDCSIKWVTEWLKFIPSSINVRGFMCQRPEQVRGMAVRELNMNMLSC
PTTTPGLPLIITPVPATAKPTALVSPSSVPSPSSRYNPLTPTIVTLPTVPDREDRERVTP
PISERIQLSIHFVNDTCIQVNWISLFTVMAYKLTWVKMGHSLVGGIVQERIVSGEKQHLS
LVNLEPKSTYRICLVPLDAYNNYRTGEDTVCSEATTKASFLNNGSNIPSSHEQTTSQNLG
SPFLLAGLIGGAVIFVLVVLLSIFCWHMHKKGRYTSQKWKYNRGRRKDDYCEAGTKKDNS
ILEMTETSFQIVSLNNDQLLKGDFRLQPIYTPNGGINYTDCHIPNNMRYCNSNVSDLEHC
HT
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Identical sequences R0LFR8
ENSAPLP00000000945 XP_005022591.1.99704 XP_005022592.1.99704 XP_012957877.1.99704 XP_012957878.1.99704 XP_012957879.1.99704 XP_012957880.1.99704 XP_012957881.1.99704

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