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Domain assignment for XP_012997342.1.53824 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_012997342.1.53824
Domain Number 1 Region: 35-287
Classification Level Classification E-value
Superfamily SET domain 1.59e-57
Family RuBisCo LSMT catalytic domain 0.00086
Further Details:      
 
Weak hits

Sequence:  XP_012997342.1.53824
Domain Number - Region: 306-396
Classification Level Classification E-value
Superfamily RuBisCo LSMT C-terminal, substrate-binding domain 0.0127
Family RuBisCo LSMT C-terminal, substrate-binding domain 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_012997342.1.53824
Sequence length 440
Comment PREDICTED: SET domain-containing protein 4 isoform X1 [Cavia porcellus]; AA=GCF_000151735.1; RF=representative genome; TAX=10141; STAX=10141; NAME=Cavia porcellus; strain=inbred line 2N; AL=Scaffold; RT=Major
Sequence
MQKGRGRTSRIRRRKLIRSSESRGVNESHKPEFIKLKKWLKDRNFEDTNLMPARFPGTGR
GLMSKTSLREGQMIISLPGSCLLTTDTVIRSSLGAYIIKWKPPPSPLLALCTFLVSEKHA
GDQSVWKPYLDILPKSYTCPVCLEPEVVNLLPEPLKAKAEEQRMSVQQFFASSRDFFSSL
QPLFEEATDSVFSYSALLWAWCTVNTRAVYLRTRRRDCLSLEPDTCALAPYLDLLNHSPN
VQVKAAFNEETGCYEIRTASDYRKHKEVFICYGPHDNHRLLLEYGFVSLCNPHACVYVSR
EILVKYLPSTDKQMNKKISILKDHGFLENLTFGWDGPSWRLLTALKLLCLEAEKFTYWTK
VLLGEVISDTNEKTSLNIAQKICCYLIEETSAVLQKVSHMKDEKVSLLSQLTLVETLWME
ELKILKASAETLTSLQTTLI
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Identical sequences H0V1L3
ENSCPOP00000003384 XP_003462269.1.53824 XP_012997339.1.53824 XP_012997342.1.53824 ENSCPOP00000003384 10141.ENSCPOP00000003384

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