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Domain assignment for XP_012998762.1.53824 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_012998762.1.53824
Domain Number 1 Region: 487-544
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.29e-21
Family Classic zinc finger, C2H2 0.0068
Further Details:      
 
Domain Number 2 Region: 543-600
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.25e-20
Family Classic zinc finger, C2H2 0.007
Further Details:      
 
Domain Number 3 Region: 263-320
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.94e-20
Family Classic zinc finger, C2H2 0.0093
Further Details:      
 
Domain Number 4 Region: 207-264
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.26e-19
Family Classic zinc finger, C2H2 0.0062
Further Details:      
 
Domain Number 5 Region: 375-432
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.49e-19
Family Classic zinc finger, C2H2 0.0074
Further Details:      
 
Domain Number 6 Region: 431-488
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.81e-19
Family Classic zinc finger, C2H2 0.0064
Further Details:      
 
Domain Number 7 Region: 151-208
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.16e-19
Family Classic zinc finger, C2H2 0.0062
Further Details:      
 
Domain Number 8 Region: 319-376
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.26e-18
Family Classic zinc finger, C2H2 0.0074
Further Details:      
 
Domain Number 9 Region: 2-45
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 1.96e-17
Family KRAB domain (Kruppel-associated box) 0.00087
Further Details:      
 
Domain Number 10 Region: 599-656
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.49e-17
Family Classic zinc finger, C2H2 0.0096
Further Details:      
 
Domain Number 11 Region: 641-693
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.16e-17
Family Classic zinc finger, C2H2 0.0065
Further Details:      
 
Domain Number 12 Region: 99-152
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000000152
Family Classic zinc finger, C2H2 0.0069
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_012998762.1.53824
Sequence length 703
Comment PREDICTED: zinc finger protein 709-like isoform X2 [Cavia porcellus]; AA=GCF_000151735.1; RF=representative genome; TAX=10141; STAX=10141; NAME=Cavia porcellus; strain=inbred line 2N; AL=Scaffold; RT=Major
Sequence
MAVTFEDVAVNFTSEEWALLNSSQKKLYRDVMEETFRNMVAIRRTGDNQEVEKECKTYWR
YLRNEETGKCYQLKAWNQYKELFLHTSDAKMNVKQTDTHSAVQIHETNCSGGKAYVCKQC
GKTFATRGYCKIHESLHTGEKPYACKQCGKAFSTRRYCHMHERLHTGEKPYVCKQCGKAF
SMKRHCQIHERTHTGEKLHVCKQCGKAFTTRGYCKVHERIHTGEKPYVCKHCGKAYSRYS
ECKIHERNHTGEKPYACKQCEKAFTTRRSCQIHERIHTGEKAYVCKQCGKAFTSQSYCQI
HERLHFGEKPYVCKQCGKAFTTHGSCQIHERTHTGEKPYICKQCGKAFSTRRYCHIHERL
HTGERHYVCKQCGKAFRTRIYCKKHERLHTGEKPYVCKQCGKAFSTRKYCQRHERCHSGE
KPYVCKQCGKAFSRNTHCQKHERIHIGEKPYVCKQCGKGFTTHGYCQIHERSHTGEKPYV
CKHCGKAFSRYSECKIHEKSHTGEQPHVCKQCGKAFSRQSEYKIHERIHTGEKPYACKQC
GKAFTTHRSCQVHERIHTGEKPYVCKQCGKAFSTNSHCQRHEKIHTGVKPYVCKQCKKAF
TTHRSCQIHERNHTGNKAYVCKHCGKAFTTHGYCKIHERLHIGEKPYVCKQCGKAFSTRR
YCQLHERCHTGEKPYVCKQCGKAFSRNTHCRRHESIHMERNSV
Download sequence
Identical sequences XP_012998762.1.53824

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