SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_013129794.1.78416 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  XP_013129794.1.78416
Domain Number - Region: 173-367
Classification Level Classification E-value
Superfamily Galactose oxidase, central domain 0.000183
Family Galactose oxidase, central domain 0.05
Further Details:      
 
Domain Number - Region: 16-99
Classification Level Classification E-value
Superfamily Bacterial hemolysins 0.000288
Family HBL-like 0.048
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_013129794.1.78416
Sequence length 402
Comment PREDICTED: olfactomedin-like protein 3B [Oreochromis niloticus]; AA=GCF_001858045.1; RF=representative genome; TAX=8128; STAX=8128; NAME=Oreochromis niloticus; AL=Chromosome; RT=Major
Sequence
MKLLFALLISTAWTFTGAQYYYQGLMDYLENRLLAIEDRMQLWHEQSHRYHTEMKDFKKL
TAEAMDGLKNHHSMLFKDLEGAAARVDRVEQEMDYVETQMSPRACTNRADKVVEQDAWEL
EESRGEEEEEEEWEELQSRVSDCVEIISGIRSVKIMKRVGSPKGMWTRDPRSSKVYIFNG
TSGNTIYQFKSLLDFSRSLGVTGSRSIRLPSEWSGPGSAVYNGYLYYIKQEAEADMQVVK
YDLLSGSVTETAMFPVEGRATVYNLNPETVADLAADDGGLWLLYAPSDSEPTISLAKMDA
ATLDIEQIWDTRCPRENAEAAFVVCGTVYVVYNTRLASRSRVQCVFDVNDMVLSEEAPLI
YFPRRYGAHASLKYNPEEKQLYGWDDGYQIIYRLTMKRKLLA
Download sequence
Identical sequences I3KIE4
ENSONIP00000020889 ENSONIP00000020889 XP_005448459.1.78416 XP_013129794.1.78416

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]