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Domain assignment for XP_013376718.1.28644 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_013376718.1.28644
Domain Number 1 Region: 172-234
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 6.28e-25
Family KRAB domain (Kruppel-associated box) 0.0014
Further Details:      
 
Domain Number 2 Region: 402-458
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.9e-22
Family Classic zinc finger, C2H2 0.0051
Further Details:      
 
Domain Number 3 Region: 861-917
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.1e-21
Family Classic zinc finger, C2H2 0.0064
Further Details:      
 
Domain Number 4 Region: 748-805
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.34e-20
Family Classic zinc finger, C2H2 0.0077
Further Details:      
 
Domain Number 5 Region: 458-514
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.37e-20
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 6 Region: 805-861
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.29e-20
Family Classic zinc finger, C2H2 0.0081
Further Details:      
 
Domain Number 7 Region: 902-954
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.31e-19
Family Classic zinc finger, C2H2 0.0039
Further Details:      
 
Domain Number 8 Region: 711-762
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000000013
Family Classic zinc finger, C2H2 0.0071
Further Details:      
 
Domain Number 9 Region: 366-415
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000181
Family Classic zinc finger, C2H2 0.0042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_013376718.1.28644
Sequence length 1023
Comment PREDICTED: zinc finger protein 316 [Chinchilla lanigera]; AA=GCF_000276665.1; RF=representative genome; TAX=34839; STAX=34839; NAME=Chinchilla lanigera; AL=Scaffold; RT=Major
Sequence
MAALHTILDSPATQLERVEDGSECDPDQEEEEEKGRDMEEVEEEEVEEEEEEEEIVIEEE
EAEEVAEVIEEAEVQEVAEVEVEAEFEEDNDDDDEDDEDNDDDDDDDVEDVLAEEQSSGL
GTQEQLSHVDDAKSPVWGKVPQMCRTPSAAQEEDLEEEEEEDEDDDDDFLTAGSQGLVTF
EDVAVYFSLEEWERLDADQRGLYQDVMQENYGILVSLGYPVPKPDLIFRLENGEEPWVPD
SPHPEDGDIVTGVYTGAWYWTDDMEDHEEEDEEDFLAEMAEEENEPPGLWSAAYGVGDVP
GTWGPDDSDSAQTPEGWGSDSGNLGVLAEESEAKSFLPDQEPGTNLVAPWAYPTPVDAPT
GRPETTCDVCGKVFPHRSRLAKHQRYHAAVKPFGCEECGKGFVYRSHLAIHQRTHTGEKP
FPCPDCGKRFVYKSHLVTHRRIHTGERPYRCAFCGAGFGRRSYLVTHQRTHTGERPYPCA
HCGRSFSQSSALARHQAVHTADRPHCCPDCGQAFRLRADFQRHRRSGSCADPGGDGPRRE
SCEAALVAGPEEPETAPEGPEEPEAGETDGDPEAEVREEAAAAEVPAPESKKDPELSRRF
LEMGNGLDEGEGPSSHTLGFHFPVHPKSWLHPDGFQILGLPDFGERLPADGRALPGPLGA
PLALAEGAGLARDPFGGAGVGAGLGLRVFAPAVGGLLAEPAPAALAEEESPWICSDCGKT
FGRRAALAKHQRYHAGERPHRCADCGKSFVYGSHLARHRRTHTGERPFPCPECGARFARG
SHLAAHVRGHTGEKPFVCGVCGAGFSRRAHLTAHGRAHTGERPYACGECGRRFGQSAALT
RHQWAHAEEKPHRCPDCGKGFGHSSDFKRHRRTHTGEKPFRCADCGRGFAQRSNLAKHRR
GHTGERPFPCPECGKRFSQRSVLVTHQRTHTGERPYACVHCGRRFSQSSHLLTHMKTHRG
AAGAPGQAGPATPAPKADSPARGQQSAGSVPGELGSALLEFAGGTSFGSEAAFAGPSAAY
EES
Download sequence
Identical sequences XP_013376718.1.28644

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