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Domain assignment for XP_013762059.1.50528 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_013762059.1.50528
Domain Number 1 Region: 1196-1356
Classification Level Classification E-value
Superfamily WD40 repeat-like 0.000000183
Family WD40-repeat 0.052
Further Details:      
 
Domain Number 2 Region: 939-1030
Classification Level Classification E-value
Superfamily RNI-like 0.000000863
Family Cyclin A/CDK2-associated p19, Skp2 0.038
Further Details:      
 
Domain Number 3 Region: 187-276
Classification Level Classification E-value
Superfamily Nucleotidyltransferase 0.0000131
Family Catalytic subunit of bi-partite nucleotidyltransferase 0.087
Further Details:      
 
Weak hits

Sequence:  XP_013762059.1.50528
Domain Number - Region: 1084-1154
Classification Level Classification E-value
Superfamily RNI-like 0.011
Family 28-residue LRR 0.034
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_013762059.1.50528
Sequence length 1501
Comment hypothetical protein AMSG_00880 [Thecamonas trahens ATCC 50062]; AA=GCF_000142905.1; RF=representative genome; TAX=461836; STAX=529818; NAME=Thecamonas trahens ATCC 50062; strain=ATCC 50062; AL=Scaffold; RT=Major
Sequence
MQSDKPCPSSDDISNAVNCLRSAVSAGEVAPADVTSLMPLLLAYDKRRSPTPPWALSINL
CIDVLVSARNAPPHQLIAFLAELFVDAGELMTAALLYASLPLVALSASTADLASPMNMLG
LGEDGLRETFDRLVIIASTVARVYGPDDPAVGDLVHTANVLGRASLQQLPPVESASLAMG
CVADTLQRMLARVKAEAAERAEPLSPRLTALFHHVIHLLVLPLLPTPPLEYALLGLGSMA
RSELSASSDIDCMVLVASKPTADEASWLNIFATLIELCMVAFGETQAHIGPYAVLSRPAG
FHLDEALLSPRHMQLTVTQAIERQRAELRRLATEPNADIDPIAGALRNACFVAGSRTLYG
DYIDRLAELFASPSQELGLYSLSRNCSKTHGVFAPQTSTGAFSGTAHLKPLILRPISLLA
DGCMLALAPHDAARILFTVDRLDCLSGPTLEAFPPPVARALAVIFEQAMALRDAYAPSFA
TMQALAHDAAQLLGPIAAGIDALCTSQLPPRMAAKDALGNPLLHEEALLRLALDSFSAVR
VSPAVRDDPEFEGQRAAVASGLGDGACFAGIEPQSVRLLSPEAVAALDATPAAVFALPRA
SIFWRNAQLEAVLEPAVSPLATRTYHAIHALGALALGPPTGRISDIAFAGSSPAATSVYI
VIRGQLQEYRLRLRRASAVPLTEALTATSSTVLERVTNLPHVAHAVLLSLFAGLAHCGPD
AYEIDESGLLYVGGPEPAPFNSSASLASILLASRAVLESTVPQAVHARLAALAPRAVVEA
WMSAACRDNDDLVRPAYLSVLLNRLYAAKTVAASRDVGTLALGDLAGAIDARLVDRYRAR
IASERGHTPLKVFRKVAKSLSEPTTPSVSASTASLAQIWSSMTSTSSAQADDETDTPDAR
LRALAALKVDAWIETFLEHFPWASAQLEVQVSLLNVLPQLRLRRLVLSGCTAVTSTRLST
IMAASRGSLVDLDVSGCTALDSLLWMTSKRRNWALARVNLAGCTLLGGGDVAALEAAAPH
LAWLQLSSDMDLCGTYYEVTAGSPSLVRQAVRPQIRIALDALVRPEPTPRFVTASTLAIC
RADFSKAGLHDEFGVALARVLLDKRAPHVTDVSVAGNELTAVGVLALVNAFASADDQSRL
VSVTVADNAFDVDGDADLRMLLLRMSSSLRMSGRVLDYGVQPASRAVFFGDSGMDVSMVA
DAAINPSGDRLAWLAHPGVWVATIREDDDGYGIQIPIWTRVVCRDVCAVEWLSDDVLVLG
TSGGAVGTARLDGHDPAFGCIHAGDAVTSMAVLPGERVLVGRASGVLHEVELSEVAYEAE
SLVLHSSPIHALAILPDSRVATASFDGVVGLWLRAGAGWVLLDHWRAPTGSEIGPMVATA
AGELLVALAHPTQLLAVAFEGSKPAARVVWEVDDGAEGLCVVTHLTPWAGRCVSRDGLTR
VVELDDETTNVRRAPGLLCPVRSAVRWYWLVWDCDVFGVVADGSLPRPHRQFDLCELQRS
V
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Identical sequences A0A0L0DL04
AMSG_00880T0 XP_013762059.1.50528

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