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Domain assignment for XP_013832840.1.46622 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_013832840.1.46622
Domain Number 1 Region: 277-334
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.46e-25
Family Classic zinc finger, C2H2 0.0051
Further Details:      
 
Domain Number 2 Region: 333-390
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.35e-23
Family Classic zinc finger, C2H2 0.0059
Further Details:      
 
Domain Number 3 Region: 68-131
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 1.57e-21
Family KRAB domain (Kruppel-associated box) 0.0014
Further Details:      
 
Domain Number 4 Region: 417-474
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.35e-21
Family Classic zinc finger, C2H2 0.0076
Further Details:      
 
Domain Number 5 Region: 459-511
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.24e-18
Family Classic zinc finger, C2H2 0.0068
Further Details:      
 
Domain Number 6 Region: 380-412
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000473
Family Classic zinc finger, C2H2 0.013
Further Details:      
 
Domain Number 7 Region: 239-291
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000215
Family Classic zinc finger, C2H2 0.023
Further Details:      
 
Weak hits

Sequence:  XP_013832840.1.46622
Domain Number - Region: 2-40
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 0.00215
Family SCAN domain 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_013832840.1.46622
Sequence length 524
Comment zinc finger protein ZFP69 isoform X2 [Sus scrofa]; AA=GCF_000003025.6; RF=representative genome; TAX=9823; STAX=9823; NAME=Sus scrofa; breed=Duroc; AL=Chromosome; RT=Major
Sequence
MLQQLLITLPAEASTWVKLCHPEKATEGAPLWEDVTKMLEGEALLSQDANETQGKSLKVE
VTPRDPTAEPQEQLTFRDVSVDFTQEEWGQLAPAHRHLYREVMLENYGNLVSVARYQLSK
PSVISQLEKGEEPWMTEKEGPGDPSSGLTSKTETSVSTAENDIVQEQLYHSMMMERLMRD
DVIYSTLREVSKYDYELERQQDSCGRDMRQTIWTHKKRGQETSKFGRSITSSNIVIEQRH
HKCDMPKKRNKYKSNLINHPMSYIRTKTYECNICEKVFKQPIHLTEHMRIHTGEKPFRCK
ECGRAFSQSASLNTHQRIHTGEKPFECEECGKAFRHRSSLNQHHRTHTGEKPYVCDKCQK
AFSQNISLIQHLRTHSGEKPFTCNECGKTFRQIRHLSEHVRIHTGEKPYACTACCKTFSH
RAYLTHHQRIHTGERPYKCKECGKAFRQRIHLSNHKTVHTGVKAYECKRCGKAYRHDSSF
KKHQRHHTGEKPYECNECGKAFSYNSSLTRHHEIHRRNAFQDNM
Download sequence
Identical sequences F1SCQ7
ENSSSCP00000004302 ENSSSCP00000004302 XP_005665581.1.46622 XP_013832839.1.46622 XP_013832840.1.46622

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