SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_014397412.1.60319 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_014397412.1.60319
Domain Number 1 Region: 44-132
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 3.11e-35
Family SCAN domain 0.000049
Further Details:      
 
Domain Number 2 Region: 413-470
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.76e-26
Family Classic zinc finger, C2H2 0.0032
Further Details:      
 
Domain Number 3 Region: 469-526
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.91e-26
Family Classic zinc finger, C2H2 0.0039
Further Details:      
 
Domain Number 4 Region: 513-571
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.85e-22
Family Classic zinc finger, C2H2 0.0037
Further Details:      
 
Domain Number 5 Region: 357-414
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.67e-21
Family Classic zinc finger, C2H2 0.0074
Further Details:      
 
Domain Number 6 Region: 319-371
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.49e-20
Family Classic zinc finger, C2H2 0.0034
Further Details:      
 
Domain Number 7 Region: 213-270
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.00000000902
Family KRAB domain (Kruppel-associated box) 0.0048
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_014397412.1.60319
Sequence length 577
Comment PREDICTED: zinc finger protein with KRAB and SCAN domains 8 [Myotis brandtii]; AA=GCF_000412655.1; RF=representative genome; TAX=109478; STAX=109478; NAME=Myotis brandtii; AL=Scaffold; RT=Major
Sequence
MAAESRKSLAPSPSNQAPEEDLVIVKVEEDHGWDQESSPHEHNPPGQELFRLRFRKLCYQ
ETQGPREALIQLRALCHQWLRPDLNSKEQILELLVLEQFLSILPTELQALVKEHQLESGE
EVVTLLEDLERQIDILGRPVPARAHGHRVLWEEVVHSEPALEPPDAPLQPPATRHIAPGL
HGPRDRAVSASHSPTPSQKGSPGNQMAASLLTAGFQTLEKIEDMAVSLIREEWLLNPSQK
DLKGDDRQESYRSMFSLGGETRNENKELASKQVISTGAQLHGETAAKCNGDIIGGLERGE
AQDLLGRLERQRGNPTQERRHKCDECGKSFAQSSGLVRHWRIHTGEKPYQCNVCGKAFSY
RSALLSHQDIHNKVKRYHCKECGKAFSQNTGLILHQRIHTGEKPYQCNQCGKAFSQSAGL
ILHQRIHSGERPYECNECGKAFSHSSHLIGHQRIHTGEKPYECDECGKTFRRSSHLIGHQ
RSHTGEKPYKCNECGRAFSQKSGLIEHQRIHTGERPYKCKECGKAFNGNTGLIQHLRIHT
GEKPYQCNECGKAFIQRSSLIRHQRIHTAEKSETIGV
Download sequence
Identical sequences XP_005869068.1.60319 XP_014397412.1.60319

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]