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Domain assignment for XP_014737909.1.99236 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_014737909.1.99236
Domain Number 1 Region: 478-658
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 2.61e-50
Family SPRY domain 0.00081
Further Details:      
 
Domain Number 2 Region: 165-230
Classification Level Classification E-value
Superfamily B-box zinc-binding domain 1.98e-17
Family B-box zinc-binding domain 0.000031
Further Details:      
 
Domain Number 3 Region: 2-88
Classification Level Classification E-value
Superfamily RING/U-box 0.00000000000000114
Family RING finger domain, C3HC4 0.02
Further Details:      
 
Domain Number 4 Region: 374-483
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000000218
Family Fibronectin type III 0.002
Further Details:      
 
Weak hits

Sequence:  XP_014737909.1.99236
Domain Number - Region: 109-161
Classification Level Classification E-value
Superfamily RING/U-box 0.00318
Family ZZ domain 0.046
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_014737909.1.99236
Sequence length 667
Comment PREDICTED: E3 ubiquitin-protein ligase Midline-1 [Sturnus vulgaris]; AA=GCF_001447265.1; RF=representative genome; TAX=9172; STAX=9172; NAME=Sturnus vulgaris; AL=Scaffold; RT=Major
Sequence
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESITAFQCPTCR
YVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDNNSMSSCEKVLCQ
FCDQDPAQEAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSDRYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQETKLMEECDQLIEIIQQRRQIIGTKIKEGKVVRLRKLAQQIA
NCKQCIERSTSLISQAEQSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFTREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDETSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGISYKSAPKHEWIGKNSASWVLCRCNNTWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSLAFYDALNSLHLYTFDITFGQPVCPTFTVWNKCLTIITGLPIPDHL
DSSEQLA
Download sequence
Identical sequences A0A091EV23 A0A093Q308 H0ZDE7 U3JPI3
XP_002186604.1.42559 XP_005037462.1.66865 XP_005037463.1.66865 XP_005037464.1.66865 XP_005516680.1.90289 XP_008634112.1.15636 XP_008925060.1.51550 XP_008925060.1.96775 XP_010392684.1.2935 XP_014737905.1.99236 XP_014737906.1.99236 XP_014737907.1.99236 XP_014737908.1.99236 XP_014737909.1.99236 XP_014737910.1.99236 XP_014737911.1.99236 XP_015496553.1.82291 XP_015496563.1.82291 XP_015496573.1.82291 XP_015496580.1.82291 XP_015496587.1.82291 XP_016154468.1.66865 XP_016154470.1.66865 XP_016154473.1.66865 XP_017592648.1.15636 XP_017592649.1.15636 XP_017592651.1.15636 XP_017592652.1.15636 XP_017667848.1.3805 XP_017667849.1.3805 XP_017667850.1.3805 XP_017939876.1.51550 ENSTGUP00000008609 59729.ENSTGUP00000008609 ENSFALP00000004687 ENSTGUP00000008609

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