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Domain assignment for XP_014907139.1.100837 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_014907139.1.100837
Domain Number 1 Region: 227-375
Classification Level Classification E-value
Superfamily Ribonuclease H-like 5.57e-28
Family DnaQ-like 3'-5' exonuclease 0.00076
Further Details:      
 
Domain Number 2 Region: 498-584,643-701
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 4.64e-17
Family Canonical RBD 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_014907139.1.100837
Sequence length 809
Comment PREDICTED: putative RNA exonuclease NEF-sp isoform X1 [Poecilia latipinna]; AA=GCF_001443285.1; RF=representative genome; TAX=48699; STAX=48699; NAME=Poecilia latipinna; AL=Scaffold; RT=Major
Sequence
MECSSSSNVLSGKKKRQNEAPSAQEDVKRRKTEEEGDEDLRRRPCGSAKVSVRLDRLRQP
ITVAQLMELLHFAALGKSRGIKQPSWCRLHHQKKVSRINVAIVDGVTQSLFYNHYLSMEH
LRSSYATRISFTSSSDDVDDVASDIFSLEVPKVDFLCLSAAEEALHDALKYHPVITAFGT
QRRGLTAYLLSQQQMIKNHYPVKGLPGFEDFLCTGSDVRVTDDSPLYGLDCEMCQTMKGN
ELARVSLVDGDGNCLLDELVKPQNHVIDYLTRFSGITAAMLRPVTTTLRDVQAKIRTLLP
DDAVLVGHSLNNDLKALKLIHPHVIDTALLYRKEHGQKFKLKVLAQAVLKRQIQTEDQRG
HNPTEDAVAALDLAKYFIRMGPLQVVELHLEELWGWSLEESPDCTPEPTPSYRFADILQS
LSRPVAFLGKRAFVDLDLSHQRWYRSDKEMLSSFRNQTSHLFLSVLRFSSLSDHMKRSYA
HRYHQQQLHHNVSAVFRDMCTVFSGPFPVHFSKREVKRLFSCCGPVHKVQMRNTGVRIHA
KVEFQMLEGATLALEVLNGFSVSGQTIKVQRPVKESMLDLDLNLDALMSDRVNTNQLYVS
RLSKDVAEGLSISATVNGRLLGGKPSGFHPGRQTNGSLQTAKVNGKHLHPGTIAPDLSEE
SLREAFSPFGSIKSVTLPGMHARHARIEFESSDGKHAALSSSDHLLKTGYLTWPSMTPPH
LHSWVGMATSRKMQDAEEDAADEQRPDSFTYGGIQRNQEASLLNKLDRRLSRVFNSLPDG
TLSVVLLLRHNSRGFDHPGLCFLEVKDGF
Download sequence
Identical sequences XP_014907137.1.100837 XP_014907138.1.100837 XP_014907139.1.100837

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