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Domain assignment for XP_014996287.1.72884 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_014996287.1.72884
Domain Number 1 Region: 230-354
Classification Level Classification E-value
Superfamily Cadherin-like 8.82e-32
Family Cadherin 0.001
Further Details:      
 
Domain Number 2 Region: 443-565
Classification Level Classification E-value
Superfamily Cadherin-like 1.57e-27
Family Cadherin 0.0029
Further Details:      
 
Domain Number 3 Region: 343-447
Classification Level Classification E-value
Superfamily Cadherin-like 1.96e-23
Family Cadherin 0.0027
Further Details:      
 
Domain Number 4 Region: 126-235
Classification Level Classification E-value
Superfamily Cadherin-like 4.84e-22
Family Cadherin 0.0026
Further Details:      
 
Domain Number 5 Region: 559-669
Classification Level Classification E-value
Superfamily Cadherin-like 8.57e-16
Family Cadherin 0.0021
Further Details:      
 
Domain Number 6 Region: 29-124
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000000642
Family Cadherin 0.0077
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_014996287.1.72884
Sequence length 949
Comment PREDICTED: protocadherin alpha 5 isoform X10 [Macaca mulatta]; AA=GCF_000772875.2; RF=representative genome; TAX=9544; STAX=9544; NAME=Macaca mulatta; AL=Chromosome; RT=Major
Sequence
MVFSWQGGPRQRQLLLWLLILTAWETSSGQLHYSVPEEAKHGTFVGRIAQDLGLELAELV
PRLFRVASKTHGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHVE
VKVRDINDNPPVFPESKKRITIAESRPPETRFPLDGASDADIGVNSALTYRLYPNDYFAL
DTQNSREQMSSLSLILRKTLDREEIQEHTLLLTASDGGKPELTGTVQLLITILDVNDNAP
EFYQSVYKVTMLENAFNGTLVIKLNATDPDDGTNGDIVYSFRRPVSPAVVYAFTINPNNG
EIRTKGKLDFEEKKLYEISVEAVDKGNIPMAGHCTLLVEVLDVNDNAPEVTITSLSLPIR
EDTQPSAIIALISVSDRDSGSNGQVTCTLTPHVPFKLVSTYKNYYSLVLDSALDRESVSA
YELVVTARDGGSPSLWATASVSVGVADVNDNAPAFAQSEYTVFVKENNPPGCHIFTVSAR
DADAQENALVSYSLVERRVGERALSSYVSVHAQSGKVYVLQPLDHEELELLQFQVSALDA
GVPPLGSNVTLQVFVLDENDNAPALLTPGAGSAGGTVSELVPRSVGAGHVVAKVRAVDAD
SGYNAWLSYELQPAAVGSRIPFRVGLYTGEISTTRSLDEVDARRHRLLVLVKDHGEPALT
ATATVLLSLVESGQQPKASSRASAGAVGQEAALVDVNVYLIIAICAVSSLLVLTLLLYTA
LRCSSPRTEGACALGKPTLVCSSAVGSWSYSQQRQQRVCSGEGPPKTDLMAFSPSLPPCL
GSAEGTGQREDSECLKEPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPT
VSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQ
EPTNNQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
Download sequence
Identical sequences Q3V7A5
XP_014996287.1.72884 ENSMMUP00000019132

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