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Domain assignment for XP_014996541.1.72884 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_014996541.1.72884
Domain Number 1 Region: 232-358
Classification Level Classification E-value
Superfamily Cadherin-like 5.14e-29
Family Cadherin 0.0008
Further Details:      
 
Domain Number 2 Region: 340-464
Classification Level Classification E-value
Superfamily Cadherin-like 1.14e-24
Family Cadherin 0.0019
Further Details:      
 
Domain Number 3 Region: 445-571
Classification Level Classification E-value
Superfamily Cadherin-like 4.43e-24
Family Cadherin 0.001
Further Details:      
 
Domain Number 4 Region: 129-236
Classification Level Classification E-value
Superfamily Cadherin-like 4.57e-22
Family Cadherin 0.0027
Further Details:      
 
Domain Number 5 Region: 561-667
Classification Level Classification E-value
Superfamily Cadherin-like 1.57e-17
Family Cadherin 0.0016
Further Details:      
 
Domain Number 6 Region: 31-121
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000000485
Family Cadherin 0.0068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_014996541.1.72884
Sequence length 934
Comment PREDICTED: protocadherin gamma-C3 isoform X6 [Macaca mulatta]; AA=GCF_000772875.2; RF=representative genome; TAX=9544; STAX=9544; NAME=Macaca mulatta; AL=Chromosome; RT=Major
Sequence
MVPEAWRSGLVSTGRVVGVLLLLGALNKASTVIHYEILEEREKGFAVGNVVANLGLDLGS
LSARRLRVVSGASRRFFEVNRETGEMFVNDRLDREELCGTLPSCTVTLELVVENPLELFS
VEVVIQDINDNNPAFPTQEMKLEISEAVAPGTRFPLESAHDPDVGSNSLQTYELSRNEYF
ALRVQTREDSTKYAELVLERALDREREPSLQLVLTALDGGTPALSASLPIHITVLDANDN
APVFNQSLYRARVLEDAPSGTRVVQVLATDLDEGPNGEIIYSFGSHNRAGVRELFALDLV
TGMLTIKGRLDFEDTKLHEIYIQAKDKGASPEGAHCKVLVEVVDVNDNAPEITVTSVYSP
VPEDAPLGTVIALLSVTDLDAGENGLVTCEVPAGLPFSLTSSLKNYFTLKTSADLDRETV
PEYNLSITARDAGTPSLSALTIVRVQVSDINDNPPQSSQSSYDVYIEENNLPGAPILNLS
VWDPDAPQNARLSFFLLEQGAETGLVGRYFTINRDNGIVSSLVPLDYEDRREFELTAHIS
DGGTPVLATNISVNIFVTDRNDNAPQVLYPRPGGSSVEMLPRGTSAGHLVSRVVGWDADA
GHNAWLSYSLLGAPNQSLFAIGLHTGQISTARPVQDTDSPRQTLTVLIKDNGEPSLSTTA
TLTVSVTEDSPEARAEFPSGSAPREQNKNLTFYLLLSLILVSVGFVVTVFGVIIFKVYKW
KQSRDLYRAPVSSLYRTPGPSLHADAVRGGLMSPHLYHQVYLTTDSRRSDPLLKKPGAAS
PLASRQNTLRSCDPVFYRQVLGAESAPPGQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTW
PNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIP
GSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
Download sequence
Identical sequences A0A2K5X214 F6S1Y6
ENSMMUP00000028916 XP_014996541.1.72884 XP_015307516.1.63531

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