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Domain assignment for XP_015002569.1.72884 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_015002569.1.72884
Domain Number 1 Region: 6-91
Classification Level Classification E-value
Superfamily PDZ domain-like 1.58e-20
Family PDZ domain 0.0000454
Further Details:      
 
Domain Number 2 Region: 644-708
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 2.34e-18
Family LIM domain 0.0092
Further Details:      
 
Domain Number 3 Region: 585-648
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.14e-17
Family LIM domain 0.0096
Further Details:      
 
Domain Number 4 Region: 552-583
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.00000143
Family LIM domain 0.0015
Further Details:      
 
Domain Number 5 Region: 704-728
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 0.0000222
Family LIM domain 0.026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_015002569.1.72884
Sequence length 735
Comment PREDICTED: LIM domain-binding protein 3 isoform X1 [Macaca mulatta]; AA=GCF_000772875.2; RF=representative genome; TAX=9544; STAX=9544; NAME=Macaca mulatta; AL=Chromosome; RT=Major
Sequence
MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTM
THLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQTPLPVIPHQKDPALDTNGSLVAP
SPSPEARASPGTPGTPELRPTFSPAFSPPSAFSSLAEASAPGPPRVRLRAKTSPDGARDL
LGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGVGLPGGSLPIKDLAVD
SASPVYQAVIKNQNKPEDEADEWARRSSNLQSRSFRILAQMTGTEFMQDPDEEALRRSST
PIEHAPVCTSQATTPLLPASAQPSAAASPSAASPPLATAAAHTAITSAAATAPASSPADS
PRPQASSYSPATAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPASTYSPSP
GANYSPTPYTPSPTPAYTPSPAPAYTPSPAPAYTPSPAPTYTPSPALAYTPSPAPNYNPA
PSAAYSGGPAEPASRPPWVTDDSFSQKFAPGKSTTSISKQTLPRGGPAYTPAGPQVPPLA
RGTVQRAERFPASSRTPLCGHCNNVIRGPFLVAMGRSWHPEEFNCAYCKSSLADVCFVEE
QNNVYCERCYEQFFAPLCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHMED
GEPYCEKDYINLFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSK
KDRPLCKKHAHTINL
Download sequence
Identical sequences ENSMMUP00000004815 ENSMMUP00000004814 XP_015002569.1.72884 9544.ENSMMUP00000004815

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