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Domain assignment for XP_015201288.1.81211 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_015201288.1.81211
Domain Number 1 Region: 2087-2192
Classification Level Classification E-value
Superfamily PDZ domain-like 2.63e-28
Family PDZ domain 0.00012
Further Details:      
 
Domain Number 2 Region: 1727-1836
Classification Level Classification E-value
Superfamily PDZ domain-like 5.78e-28
Family PDZ domain 0.022
Further Details:      
 
Domain Number 3 Region: 353-460
Classification Level Classification E-value
Superfamily PDZ domain-like 5.39e-26
Family PDZ domain 0.0016
Further Details:      
 
Domain Number 4 Region: 1186-1298
Classification Level Classification E-value
Superfamily PDZ domain-like 7.62e-25
Family PDZ domain 0.0000346
Further Details:      
 
Domain Number 5 Region: 238-339
Classification Level Classification E-value
Superfamily PDZ domain-like 1.84e-24
Family PDZ domain 0.011
Further Details:      
 
Domain Number 6 Region: 1843-1930
Classification Level Classification E-value
Superfamily PDZ domain-like 1.97e-24
Family PDZ domain 0.0076
Further Details:      
 
Domain Number 7 Region: 1976-2074
Classification Level Classification E-value
Superfamily PDZ domain-like 1.2e-23
Family PDZ domain 0.0023
Further Details:      
 
Domain Number 8 Region: 128-233
Classification Level Classification E-value
Superfamily PDZ domain-like 2.76e-23
Family PDZ domain 0.0099
Further Details:      
 
Domain Number 9 Region: 1474-1566
Classification Level Classification E-value
Superfamily PDZ domain-like 6.84e-23
Family PDZ domain 0.031
Further Details:      
 
Domain Number 10 Region: 687-784
Classification Level Classification E-value
Superfamily PDZ domain-like 1.58e-21
Family PDZ domain 0.0083
Further Details:      
 
Domain Number 11 Region: 1597-1691
Classification Level Classification E-value
Superfamily PDZ domain-like 3.94e-20
Family PDZ domain 0.0069
Further Details:      
 
Domain Number 12 Region: 4-63
Classification Level Classification E-value
Superfamily L27 domain 1.57e-19
Family L27 domain 0.00065
Further Details:      
 
Domain Number 13 Region: 547-631
Classification Level Classification E-value
Superfamily PDZ domain-like 2.63e-19
Family PDZ domain 0.037
Further Details:      
 
Domain Number 14 Region: 1037-1113
Classification Level Classification E-value
Superfamily PDZ domain-like 4.73e-18
Family PDZ domain 0.0083
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) XP_015201288.1.81211
Sequence length 2193
Comment PREDICTED: multiple PDZ domain protein isoform X4 [Lepisosteus oculatus]; AA=GCF_000242695.1; RF=representative genome; TAX=7918; STAX=7918; NAME=Lepisosteus oculatus; AL=Chromosome; RT=Major
Sequence
MIETIDTQRALQAVERLQAKLKERGDVLTEEKLNMLKTVLQSPLFQQILTLQTSVQQLKE
QVDAGPASLSPNTELPQTIKPGLCSLPLSDSYVLAQQNGNYGIQRDTPALSITPQINGKP
SVDEFEHLIRSMAQGRYVMHIELVKPISGGLGFSVVGLKSENRGELGIFVQEIQPGSVTH
CDGKLKEGDQILSINGQPLDQTITHQEAISILQKASEKVNLIVARGPIPQLASPVVSRTP
SAASTLSAHSSATHWQHMETIELVNDGTGLGFGIVGGKSTGVIVKTILQGGVADQDGRLR
SGDHILKIGDTDLHGMGSEQVAQVLRQCGNRVKLVITRGAIEDSSAPPAPVLPPVVELQC
EMTDYEEDDIDAFDVELTKNAQGLGITIAGYVGDKTSEPSGIFVKSITKGSAVEQDGRIH
IGDQIIAVDGTNIQGFTNQQAVEVLRHTGQTVHLKLMRRGFRPEEPLISEHKPLPKVVKE
LAVDRMDSDITIEDSDRKQKPYPSICGSSSITPTEDEQIQSKEGTLLTAVEEEELKKKWQ
SLLGPSNEVVVAQVEKFSESSGLGISLEASSGHHYIRSVLPEGPVGRSGRLFSGDELLEV
NGISLIGENHKEVISILKELPVFVTLVCCRPALLLDSDSDIGGKNGLQEHFDEPEQKVHL
DLGDCVGSSETDDIVKENVTEETLGSSLAMWETEIQDIELEKGDMGLGFSILDYQDPVDP
EKTVIVIRSLVPDGVAEVDGRLLPGDRLMFVNDTNLENASLEDAVQALKGAPVGKVRIGV
AKPLPPTPEEGCSSAKDDSIFYTAQQFEDEEQADAAVFHAELAMIDSNEADLTDEKTFDS
QYPGEEDDTFQESMLALHGSTCSVDLDYQLSMHSSTPKSTYEDAFAKPSFSAATEFADEA
EPFFPEEKRITLFQPWKATSSALPFGATNKTPSPEQHINLMETDCVMPEVVQSEPCSALN
HDKRSIQSFETEMELDKASDACAEYKPCHEGSVSTDPGREDTDDRSSHQEGFVPVKRNED
MEDQGLVENIDNEMFSSGSSFERTITVVKGNSSLGMTVSAVKDGSGMIIRSIIHGGSISR
DGRLAVGDCILAINGEPTTNLTNAQARAMLRRHSLIGPDIRSSCAPADDQSPFYVITYVP
SEYLEEYRISLVHLKDETTSGAPSTCAEAGELPEREDGEGEESEMQSSAYSNWNQPRKVE
LFREAGKSLGISIVGGRGMGSRLNNGEVMRGIFIKHILEDSPAGRNGTLKTGDRIVEVDG
IDLRDASHEQAVEAIRKAGNPVVFMVQSIVHRPRPDSFYSPSSSPVIEKHITTMPLPHQL
CKKPPLPFLLPKPIPEPAFSSTNPFVASFQPSLFQTMTTESNEEKCIPTSNVIAKHEIKI
KGSESHSRLFLRLSPTNPFAPTPFKAPSNRLDLEAGKVSLSVPLVSSLPVVPPIGETETD
TLMEPENLALPMDSPDEEEDEFGYSWKKIIQRYGSLPGVLHMIELEKGKTGLGLSLAGNK
DRSRMSVFVVGIDPSGAAGRDGRILVGDELLEINGQILYGRSHQNASSIIKSAPSKVKII
FIRNTDALNQMAAGPVKECGDMLESQTELDMCAVSPSAIDFDLFKNIQHIILPKDQGGLG
IAISEEDTSGGVVIKSLTDNGAAGKDGRIKVNDKILAVDDETVVGCPVEKVINLLKRSKS
TVKLTICSEDLSSLSSCVNLPESASDVKISQSLPTAFISDVDPFKNASRSSTPATMASDP
VTCPIIPGCETTIDISKGRTGLGLSIVGGSDTLLGAIIIHEVYEEGAASKDGRLWAGDQI
LEVNGIDLRNATHDEAINVLRQTPQKVRLTVYRDEAQYKEDDMWDVFFLELQKKPGEGLG
LSIVGKRNDTGVFVSDIVKGGIADTDGRLMQGDQILSVNGEDVRSATQESVAALLKCCIG
TITLEVGRYKAGPFHSERRLSHSSQVSETGSFGASSCLSGSGSGLGDNFESRRKSLDSGS
DFQELRTVEFTKGPLDSLGISIAGGVGSPLGDIPIFIAMMHPTGLAAQTQKLKIGDRIVS
ICGTSTEGMSHSQAVTLLKNASGTIGLQVCAGGDASVTGSSHEQTASLSLSGLTASSIFH
DDLGPPQYKTITLDRGHDGLGFSIVGGFGSPHGDLPIYVKTVFVKGAASEDGRLKRGDQI
IAVNGQSLEGVTHEEAVAILKRTKGTVNLTVLS
Download sequence
Identical sequences W5N6R5
XP_015201288.1.81211 ENSLOCP00000016324

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