SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_015331058.1.76553 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_015331058.1.76553
Domain Number 1 Region: 473-679
Classification Level Classification E-value
Superfamily TPR-like 3.5e-36
Family Tetratricopeptide repeat (TPR) 0.0047
Further Details:      
 
Domain Number 2 Region: 880-1074
Classification Level Classification E-value
Superfamily TPR-like 1.74e-33
Family Tetratricopeptide repeat (TPR) 0.0087
Further Details:      
 
Domain Number 3 Region: 29-138
Classification Level Classification E-value
Superfamily TPR-like 7.82e-33
Family Tetratricopeptide repeat (TPR) 0.00082
Further Details:      
 
Domain Number 4 Region: 679-878
Classification Level Classification E-value
Superfamily TPR-like 1.04e-31
Family Tetratricopeptide repeat (TPR) 0.0067
Further Details:      
 
Domain Number 5 Region: 277-467
Classification Level Classification E-value
Superfamily TPR-like 7.59e-31
Family Tetratricopeptide repeat (TPR) 0.0078
Further Details:      
 
Domain Number 6 Region: 207-312
Classification Level Classification E-value
Superfamily TPR-like 0.0000000000129
Family Tetratricopeptide repeat (TPR) 0.014
Further Details:      
 
Domain Number 7 Region: 1049-1172
Classification Level Classification E-value
Superfamily TPR-like 0.00000228
Family Tetratricopeptide repeat (TPR) 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_015331058.1.76553
Sequence length 2447
Comment PREDICTED: tetratricopeptide repeat protein 28 [Bos taurus]; AA=GCF_000003055.6; RF=representative genome; TAX=9913; STAX=9913; NAME=Bos taurus; breed=Hereford; AL=Chromosome; RT=Minor
Sequence
MKNIPLFGAKTIGRRSPDGPVLSKAEFVEKVRQSNQACHDGDFHTAIVLYNEALAVDPQN
CILYSNRSAAYMKIQQYDKALDDAIKARLLNPKWPKAYFRQGVALQYLGRHADALAAFAS
GLAQDPKSLQLLVGMVEAAMKSPMRDSLEPTYQQLQKMKLDKSPFVVVSVVGQELLTAGH
HGASVVVLEAALKIGTCSLKLRGSVFSALSSAYWSLGNTEKSTGYMQQDLDVAKTLGDQT
GECRAHGNLGSAFFSKGNYREALTNHRHQLVLAMKLKDREAASSALSSLGHVYTAIGDYP
NALASHKQCVLLAKQSKDELSEARELGNMGAVYIAMGDFENAVQCHEQHLKIAKDLGNKR
EEARAYSNLGSAYHYRRNFDKAMSYHNYVLELAQELMEKAIEMRAYAGLGHAARCMQDLE
RAKQYHEQQLGIAEDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQELSDYA
AQGRAYGNMGNAYNALGMYDQAVKYHRQELQISMEVNDRASQASTHGNLAVAYQALGAHD
RALQHYQNHLNIARELRDIQSEARALSNLGNFHCSRGEYVQAAPYYEQYLRLAPDLQDME
GEGKVCHNLGYAHYCLGNYQEAVKYYEQDLALAKDLHDKLSQAKAYCNLGLAFKALLNFS
KAEECQKYLLSLAQSLNNSQAKFRALGNLGDIFICKKDINGAIKFYEQQLGLAHHVKDRR
LEASAYAALGTAYRMIQKHDKALGYHTQELEVYQELSDLPGECRAHGHLAAVYMALGKYT
MAFKCYEEQLDLGQKLKDPSLEAQVYGNMGITKMNMNVMEEAIGYFEQQLAMLQQLSGNE
SVLDRGRAYGNLGDCYEALGDYEEAIKYYEQYLSVAQSLNRMQDQAKAYRGLGNGHRAMG
SLQQALVCFEKRLVVAHELGEAFNKAQAYGELGSLHSQLGNYEQAISCLERQLNIAREMK
DRALESDAACGLGGVYQQMGEYDTALQYHQLDLQIAEETNNPTCQGRAYGNLGLTYESLG
TFERAVVYQEQHLSIAAQMNDLVAKTVSYSSLGRTHHALQNYSQAVMYLQEGLRLAEQLG
RREDEAKIRHGLGLSLWASGNLEEAQHQLYRASALFETIRHEAQLSTDYKLSLFDLQTSS
YQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPYSPVTIDQILEMVNG
QRGLVLYYSLAAGYLYSWLLAPGAGILKFHEHYLGDSTVGSPSDPQTGGSAALPTAASSA
LEQHVASVREALGVESYCSRACASSETESEAGDIMDQQFEEMNNRLNSVTDPTGFLRMVR
RNNLFNRSCQSMTSLVGNTASPIKDGTSSLPRRQSSFARPPLRALYDLLVAPMEGGLMHS
SGPVGRHRQLVLVLEGDLYLIPFALLKGSSSNEYLYERFALIAVPSIRSLSPQAKSHLRK
SPPAYSSSTSMAAVVGNPKLPSAVMDRWLWGPMPSAEEEAYMVSELLGCQPLVGSVATKE
RVMSALTQAECVHFATHISWKLSALVLTPSVDGAPAGGKSSFGHPYTIPESLRVQDDASD
GESISDCPPLQELLLTAADILDLRLPVKLVVLGSSQESSSRITADGVVALTRAFLAAGAQ
CVLVSLWPVPVAASKMFLHALYSSLLNGLKASAALGEAMKVVQSSKAFSHPSNWAGFMLI
GSDVKLNSPSSLIGQALTEILQHPERARDALRVLLHLVEKSLQRIQNGQRNAMYTSQQSV
ENKVGGIPGWQALLTAVGFRLDPPASGLPAAVFFPTSDPGDRLQQCSSTVQSLLGLPNPA
LQALCKLITASETGEQLISRAVKNMVGMLHQVLVQLQAGEKEQDFASAPIQVSISVQLWR
LPGCHEFLAALGFDLCEVGQEEVILKTGKQANRRTMHFALQALLALFDSTELPKRLSLDS
SSSLESLASAQSVSNALPLGFQHPPFSPTGAESIASDAISVYSLSSIASSMSFVSKPDGG
SEGAVPRGRQDYERSKNTYPPRAALPRSPLSPPARPAGAKDEEEYEGFSIISTEPLAASQ
EDPPTGFSPDHKQSLVGTAGGVKVSVSSSTPNSPVKMTLIPSPNSPFQKVGKLASSDTGE
SDQSSTETDSTVKSQEESNSKLDPQELAQKILEETQSHLMAVERLQRGGGQGASSEDGIS
VPNSAAVFRASETSAFSRPALSHQKSQAASSSSPVTIKPKPPARSSSLPKVSSGYSSPTA
SEASAKDSPSQHSGRPSPGSDSQTSLSDQPLFKLKYPSSPYSAHISKSPRNMSPSSGHQS
PAGSAPSPALSYSSAGSARSSPADHPDLDKLKMAAIDEKVQAVHNLKMFWQSTPQHSTGP
MKILRGAPGTMTSKRDVLSLLNLSPRHNKKEEGADKLELKELSLQRRGETPPKAPPNGHW
RTETTSLSTLPLPARPPAPAPTRPLRLPSGNGYKFLSPGRFFPSSKC
Download sequence
Identical sequences XP_015331058.1.76553 XP_617836.7.59421

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]